RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA610520", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA610520 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6251154 6251154 PRJNA610520_S_NODE_15145_length_383_cov_9.216129_g15055_i0 PRJNA610520 15145 383 9.216129 35.29777407 Eukaryota 2759 Fungi Fungi 117 8.06e-30   NR KAG2185292.1 44442 g15055 i0 61.2 24.2584856396867 103 35 80.7 1 381 73 140 237 KAG2185292.1 hypothetical protein INT44_002082 [Umbelopsis vinacea] diamond 9291 117 1 Eukaryota Opisthokonta Fungi Mucoromycota Umbelopsidomycetes Umbelopsidales Umbelopsidaceae Umbelopsis Umbelopsis vinacea
26776936 26776936 PRJNA610520_S_NODE_10921_length_411_cov_8.952663_g10831_i0 PRJNA610520 10921 411 8.952663 36.79544493 Eukaryota 2759 Fungi Fungi 88.2 9.51e-20   NR KAI9253728.1 562976 g10831 i0 60.8 5.34306569343066 74 29 54 0 411 190 24 97 KAI9253728.1 ribosomal protein S28e-domain-containing protein [Helicostylum pulchrum] diamond 2196 89 0.991011235955056 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Helicostylum Helicostylum pulchrum
28672428 28672428 PRJNA610520_S_NODE_42467_length_289_cov_1.425926_g42377_i0 PRJNA610520 42467 289 1.425926 4.12092614 Fungi 4751 Fungi Fungi 46.2 9.16e-4   NR CEI93484.1 58291 g42377 i0 52.3 1.85813148788927 44 21 45.7 0 284 153 36 79 CEI93484.1 hypothetical protein RMCBS344292_07716 [Rhizopus microsporus] diamond 537 46.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus microsporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;