RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA609258" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 6 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA609258 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13342109 13342109 PRJNA609258_P_NODE_60171_length_242_cov_0.923077_g59786_i0 PRJNA609258 60171 242 0.923077 2.23384634 Octopus bimaculoides 37653 Mollusca Mollusca 56.5 0.002   NTclustered gi|2427286230|ref|XM_014925910.2| 37653 g59786 i0 94.444 3.27685950413223 36 2 15 0 141 176 498 463 PREDICTED: Octopus bimaculoides PWWP domain-containing protein 2A (LOC106877115), mRNA blastn 793 56.5 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
18439708 18439708 PRJNA609258_P_NODE_49155_length_253_cov_1.733333_g48770_i0 PRJNA609258 49155 253 1.733333 4.38533249 Gigantopelta aegis 1735272 Mollusca Mollusca 189 1.6799999999999996e-43   NTclustered gi|2034282593|ref|XM_041515530.1| 1735272 g48770 i0 80.738 7.34387351778656 244 45 96 2 11 253 73 315 PREDICTED: Gigantopelta aegis dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3B-like (LOC121385006), mRNA blastn 1858 189 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Neomphalida Peltospiridae Gigantopelta Gigantopelta aegis
26903577 26903577 PRJNA609258_P_NODE_34461_length_316_cov_1.283951_g34076_i0 PRJNA609258 34461 316 1.283951 4.05728516 Cephalopoda 6605 Mollusca Mollusca 50.8 1.34e-4   NR XP_052831132.1 37653 g34076 i0 70 1.92721518987342 30 9 28.5 0 316 227 1560 1589 XP_052831132.1 zinc finger protein Xfin [Octopus bimaculoides] diamond 609 50.8 1 Eukaryota Opisthokonta Metazoa Mollusca Cephalopoda Octopoda Octopodidae Octopus Octopus bimaculoides
29619130 29619130 PRJNA609258_P_NODE_39750_length_291_cov_1.431193_g39365_i0 PRJNA609258 39750 291 1.431193 4.16477163 Metazoa 33208 Mollusca Mollusca 134 1.1800000000000001e-36   NR XP_055890807.1 6526 g39365 i0 63.9 2.98969072164948 97 35 100 0 291 1 98 194 XP_055890807.1 countin-1-like [Biomphalaria glabrata] diamond 870 134 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Planorbidae Biomphalaria Biomphalaria glabrata
29840543 29840543 PRJNA609258_P_NODE_60591_length_235_cov_2.308642_g60206_i0 PRJNA609258 60591 235 2.308642 5.4253087 Venerida 6580 Mollusca Mollusca 68.6 1.05e-12   NR XP_045182493.2 6596 g60206 i0 55 3.06382978723404 60 27 76.6 0 234 55 9 68 XP_045182493.2 putative peptidyl-tRNA hydrolase PTRHD1 [Mercenaria mercenaria] diamond 720 68.6 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Venerida Veneridae Mercenaria Mercenaria mercenaria
30901699 30901699 PRJNA609258_P_NODE_54674_length_248_cov_0.891429_g54289_i0 PRJNA609258 54674 248 0.891429 2.21074392 Mytilus edulis 6550 Mollusca Mollusca 95.5 1.08e-20   NR CAG2236391.1 6550 g54289 i0 54.7 3.62903225806452 75 34 90.7 0 238 14 704 778 CAG2236391.1 unnamed protein product [Mytilus edulis] diamond 900 95.5 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;