RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2,801 rows where bioproject = "PRJNA609258" and tax_phylum = "Chordata"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Chordata · 2,801 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA609258 · 2,801 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
586316 586316 PRJNA609258_P_NODE_11641_length_571_cov_1.441767_g11266_i0 PRJNA609258 11641 571 1.441767 8.23248957 Rattus norvegicus 10116 Chordata Chordata 1053 0   NTclustered gi|298898710|emb|FQ224556.1| 10116 g11266 i0 100 83.138353765324 570 0 99 0 1 570 14 583 Rattus norvegicus TL0ACA62YE08 mRNA sequence blastn 47472 1053 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
586331 586331 PRJNA609258_P_NODE_12001_length_562_cov_1.433538_g11624_i0 PRJNA609258 12001 562 1.433538 8.05648356 Rattus norvegicus 10116 Chordata Chordata 1014 0   NTclustered gi|298904664|emb|FQ225082.1| 10116 g11624 i0 99.287 37.482206405694 561 4 99 0 2 562 1566 1006 Rattus norvegicus TL0AEA55YD07 mRNA sequence blastn 21065 1014 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
586397 586397 PRJNA609258_P_NODE_13741_length_523_cov_1.386667_g13359_i0 PRJNA609258 13741 523 1.386667 7.25226841 Mus musculus 10090 Chordata Chordata 961 0   NTclustered gi|18043505|gb|BC019566.1| 10090 g13359 i0 99.809 97.7686424474187 523 1 100 0 1 523 1596 1074 Mus musculus death associated protein 3, mRNA (cDNA clone MGC:28659 IMAGE:4235517), complete cds blastn 51133 961 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586445 586445 PRJNA609258_P_NODE_15001_length_498_cov_1.237647_g14619_i0 PRJNA609258 15001 498 1.237647 6.16348206 Mus musculus 10090 Chordata Chordata 915 0   NTclustered gi|60650507|gb|AC114424.10| 10090 g14619 i0 99.799 104.997991967871 498 1 100 0 1 498 219875 220372 Mus musculus chromosome 3, clone RP24-84L9, complete sequence blastn 52289 915 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586482 586482 PRJNA609258_P_NODE_15881_length_483_cov_1.424390_g15497_i0 PRJNA609258 15881 483 1.42439 6.8798037 Mus musculus 10090 Chordata Chordata 887 0   NTclustered gi|29881626|gb|BC051187.1| 10090 g15497 i0 99.793 75.768115942029 483 1 100 0 1 483 1457 975 Mus musculus zinc finger, RAN-binding domain containing 2, mRNA (cDNA clone MGC:57063 IMAGE:6478334), complete cds blastn 36596 887 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586517 586517 PRJNA609258_P_NODE_16661_length_471_cov_1.457286_g16277_i0 PRJNA609258 16661 471 1.457286 6.86381706 Mus musculus 10090 Chordata Chordata 861 0   NTclustered gi|2258277|gb|U79774.1|MMU79774 10090 g16277 i0 99.577 48.515923566879 473 0 100 1 1 471 499 971 Mus musculus NNP-1 var (NNP-1) mRNA, complete cds blastn 22851 861 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586606 586606 PRJNA609258_P_NODE_19001_length_438_cov_1.495890_g18617_i0 PRJNA609258 19001 438 1.49589 6.5519982 Mus musculus 10090 Chordata Chordata 809 0   NTclustered gi|71044091|gb|AC121541.31| 10090 g18617 i0 100 35.2009132420091 438 0 100 0 1 438 114453 114890 Mus musculus chromosome 5, clone RP24-132B11, complete sequence blastn 15418 809 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586614 586614 PRJNA609258_P_NODE_19221_length_435_cov_1.720994_g18837_i0 PRJNA609258 19221 435 1.720994 7.4863239 Rattus norvegicus 10116 Chordata Chordata 804 0   NTclustered gi|171846539|gb|BC161804.1| 10116 g18837 i0 100 69.3977011494253 435 0 100 0 1 435 443 877 Rattus norvegicus CD9 molecule, mRNA (cDNA clone MGC:187212 IMAGE:9101765), complete cds blastn 30188 804 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
586677 586677 PRJNA609258_P_NODE_21101_length_414_cov_1.372434_g20717_i0 PRJNA609258 21101 414 1.372434 5.68187676 Mus musculus 10090 Chordata Chordata 765 0   NTclustered gi|354798299|gb|JN962800.1| 10090 g20717 i0 100 36.7657004830918 414 0 100 0 1 414 37490 37077 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Pfas:tm1a(KOMP)Wtsi; transgenic blastn 15221 765 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586685 586685 PRJNA609258_P_NODE_21281_length_412_cov_1.380531_g20897_i0 PRJNA609258 21281 412 1.380531 5.68778772 Mus musculus 10090 Chordata Chordata 761 0   NTclustered gi|160707893|ref|NM_009658.3| 10090 g20897 i0 100 86.0558252427184 412 0 100 0 1 412 1375 964 Mus musculus aldo-keto reductase family 1 member B (Akr1b1), mRNA blastn 35455 761 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586689 586689 PRJNA609258_P_NODE_21401_length_411_cov_1.053254_g21017_i0 PRJNA609258 21401 411 1.053254 4.32887394 Mus musculus 10090 Chordata Chordata 760 0   NTclustered gi|37747489|gb|BC059938.1| 10090 g21017 i0 100 92.6277372262774 411 0 100 0 1 411 875 465 Mus musculus RIKEN cDNA 4933439C20 gene, mRNA (cDNA clone IMAGE:6485174) blastn 38070 760 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586701 586701 PRJNA609258_P_NODE_21701_length_407_cov_2.149701_g21317_i0 PRJNA609258 21701 407 2.149701 8.74928307 Mus musculus 10090 Chordata Chordata 752 0   NTclustered gi|556503828|ref|NM_053092.3| 10090 g21317 i0 100 95.1203931203931 407 0 100 0 1 407 74 480 Mus musculus lysyl-tRNA synthetase 1 (Kars1), transcript variant 2, mRNA blastn 38714 752 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586703 586703 PRJNA609258_P_NODE_21741_length_407_cov_1.401198_g21357_i0 PRJNA609258 21741 407 1.401198 5.70287586 Mus musculus 10090 Chordata Chordata 752 0   NTclustered gi|74196279|dbj|AK155088.1| 10090 g21357 i0 100 27.8869778869779 407 0 100 0 1 407 2379 1973 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630201C17 product:Hypothetical endonuclease/exonuclease/phosphatase family containing protein, full insert sequence blastn 11350 752 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586768 586768 PRJNA609258_P_NODE_23261_length_392_cov_1.222571_g22877_i0 PRJNA609258 23261 392 1.222571 4.79247832 Rattus norvegicus 10116 Chordata Chordata 725 0   NTclustered gi|2662205938|ref|NM_001427497.1| 10116 g22877 i0 100 60.4974489795918 392 0 100 0 1 392 10428 10819 Rattus norvegicus collagen type VI alpha 3 chain (Col6a3), mRNA blastn 23715 725 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
586775 586775 PRJNA609258_P_NODE_23401_length_391_cov_0.971698_g23017_i0 PRJNA609258 23401 391 0.971698 3.79933918 Mus musculus 10090 Chordata Chordata 723 0   NTclustered gi|1720427218|ref|XM_017312743.2| 10090 g23017 i0 100 99.8951406649616 391 0 100 0 1 391 2602 2992 PREDICTED: Mus musculus enhancer of mRNA decapping 4 (Edc4), transcript variant X3, mRNA blastn 39059 723 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586798 586798 PRJNA609258_P_NODE_24061_length_385_cov_1.250000_g23677_i0 PRJNA609258 24061 385 1.25 4.8125 Mus musculus 10090 Chordata Chordata 712 0   NTclustered gi|1822188035|ref|NM_028354.5| 10090 g23677 i0 100 96.0935064935065 385 0 100 0 1 385 1847 1463 Mus musculus tyrosyl-DNA phosphodiesterase 1 (Tdp1), transcript variant 2, mRNA blastn 36996 712 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586822 586822 PRJNA609258_P_NODE_24681_length_380_cov_1.013029_g24297_i0 PRJNA609258 24681 380 1.013029 3.8495102 Mus musculus 10090 Chordata Chordata 702 0   NTclustered gi|2587328259|ref|NM_001424661.1| 10090 g24297 i0 100 97.8236842105263 380 0 100 0 1 380 2277 1898 Mus musculus protein-O-mannosyltransferase 1 (Pomt1), transcript variant 4, mRNA blastn 37173 702 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586826 586826 PRJNA609258_P_NODE_24761_length_379_cov_1.274510_g24377_i0 PRJNA609258 24761 379 1.27451 4.8303929 Mus musculus 10090 Chordata Chordata 701 0   NTclustered gi|20379928|gb|BC028827.1| 10090 g24377 i0 100 69.509234828496 379 0 100 0 1 379 1124 1502 Mus musculus scaffold attachment factor B2, mRNA (cDNA clone IMAGE:5099281), partial cds blastn 26344 701 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586851 586851 PRJNA609258_P_NODE_25421_length_374_cov_1.023256_g25037_i0 PRJNA609258 25421 374 1.023256 3.82697744 Rattus norvegicus 10116 Chordata Chordata 691 0   NTclustered gi|2678962286|ref|XM_039080550.2| 10116 g25037 i0 100 99.3101604278075 374 0 100 0 1 374 4227 3854 PREDICTED: Rattus norvegicus maestro heat-like repeat family member 1 (Mroh1), transcript variant X10, mRNA blastn 37142 691 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
586867 586867 PRJNA609258_P_NODE_25841_length_370_cov_1.915825_g25457_i0 PRJNA609258 25841 370 1.915825 7.0885525 Mus musculus 10090 Chordata Chordata 678 0   NTclustered gi|74195700|dbj|AK167598.1| 10090 g25457 i0 99.73 97.4486486486486 370 1 100 0 1 370 860 1229 Mus musculus 14 days embryo liver cDNA, RIKEN full-length enriched library, clone:I530024J02 product:replication protein A1, full insert sequence blastn 36056 678 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586873 586873 PRJNA609258_P_NODE_26001_length_369_cov_1.466216_g25617_i0 PRJNA609258 26001 369 1.466216 5.41033704 Mus musculus 10090 Chordata Chordata 682 0   NTclustered gi|2416560139|ref|NM_001172113.2| 10090 g25617 i0 100 100.623306233062 369 0 100 0 1 369 524 156 Mus musculus TNF receptor-associated factor 7 (Traf7), transcript variant 1, mRNA blastn 37130 682 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
586899 586899 PRJNA609258_P_NODE_26641_length_364_cov_1.336770_g26256_i0 PRJNA609258 26641 364 1.33677 4.8658428 Mus musculus 10090 Chordata Chordata 673 0   NTclustered gi|92445970|gb|BC053993.1| 10090 g26256 i0 100 99.6593406593407 364 0 100 0 1 364 5164 4801 Mus musculus cDNA clone IMAGE:6314898, **** WARNING: chimeric clone **** blastn 36276 673 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587014 587014 PRJNA609258_P_NODE_30001_length_341_cov_1.455224_g29616_i0 PRJNA609258 30001 341 1.455224 4.96231384 Mus musculus 10090 Chordata Chordata 614 3.279999999999999e-171   NTclustered gi|23462960|gb|AC123832.4| 10090 g29616 i0 99.12 46.0645161290323 341 3 100 0 1 341 157842 157502 Mus musculus BAC clone RP24-126O19 from chromosome 9, complete sequence blastn 15708 614 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587016 587016 PRJNA609258_P_NODE_30021_length_341_cov_1.302239_g29636_i0 PRJNA609258 30021 341 1.302239 4.44063499 Mus musculus 10090 Chordata Chordata 630 3.2499999999999986e-176   NTclustered gi|2463217945|ref|NR_184780.1| 10090 g29636 i0 100 32.0146627565982 341 0 100 0 1 341 2799 3139 Mus musculus peptidase (mitochondrial processing) alpha (Pmpca), transcript variant 5, non-coding RNA blastn 10917 630 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587020 587020 PRJNA609258_P_NODE_30141_length_340_cov_1.752809_g29756_i0 PRJNA609258 30141 340 1.752809 5.9595506 Mus musculus 10090 Chordata Chordata 628 1.1699999999999999e-175   NTclustered gi|74142116|dbj|AK169370.1| 10090 g29756 i0 100 43.6 340 0 100 0 1 340 1443 1104 Mus musculus 13 days embryo liver cDNA, RIKEN full-length enriched library, clone:I920193A14 product:phosphoserine aminotransferase 1, full insert sequence blastn 14824 628 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587030 587030 PRJNA609258_P_NODE_30341_length_339_cov_1.244361_g29956_i0 PRJNA609258 30341 339 1.244361 4.21838379 Mus musculus 10090 Chordata Chordata 621 1.95e-173   NTclustered gi|74180397|dbj|AK154081.1| 10090 g29956 i0 99.705 75.4070796460177 339 1 100 0 1 339 3855 4193 Mus musculus 2 days neonate thymus thymic cells cDNA, RIKEN full-length enriched library, clone:E430037I03 product:neighbor of Brca1 gene 1, full insert sequence blastn 25563 621 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587033 587033 PRJNA609258_P_NODE_30441_length_338_cov_1.762264_g30056_i0 PRJNA609258 30441 338 1.762264 5.95645232 Mus musculus 10090 Chordata Chordata 534 2.6e-147   NTclustered gi|74213384|dbj|AK159953.1| 10090 g30056 i0 99.658 87.1863905325444 292 1 100 0 1 292 476 767 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420039M14 product:golgi associated, gamma adaptin ear containing, ARF binding protein 2, full insert sequence blastn 29469 534 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587036 587036 PRJNA609258_P_NODE_30541_length_338_cov_1.169811_g30156_i0 PRJNA609258 30541 338 1.169811 3.95396118 Mus musculus 10090 Chordata Chordata 625 1.4999999999999999e-174   NTclustered gi|74215409|dbj|AK170608.1| 10090 g30156 i0 100 99.7278106508876 338 0 100 0 1 338 626 963 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630110E09 product:Putative inorganic polyphosphate/ATP-NAD kinase (EC 2.7.1.23) (Poly(P)/ATP NAD kinase), full insert sequence blastn 33708 625 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587039 587039 PRJNA609258_P_NODE_30601_length_337_cov_2.337121_g30216_i0 PRJNA609258 30601 337 2.337121 7.87609777 Mus musculus 10090 Chordata Chordata 623 5.369999999999999e-174   NTclustered gi|13277593|gb|BC003707.1| 10090 g30216 i0 100 36.272997032641 337 0 100 0 1 337 2068 2404 Mus musculus Sec61 alpha 1 subunit (S. cerevisiae), mRNA (cDNA clone MGC:5676 IMAGE:3592772), complete cds blastn 12224 623 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587070 587070 PRJNA609258_P_NODE_31421_length_333_cov_0.900000_g31036_i0 PRJNA609258 31421 333 0.9 2.997 Mus musculus 10090 Chordata Chordata 616 8.87e-172   NTclustered gi|2451183961|ref|NR_184448.1| 10090 g31036 i0 100 31.1351351351351 333 0 100 0 1 333 2871 2539 Mus musculus cyclin G1 (Ccng1), transcript variant 2, non-coding RNA blastn 10368 616 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587090 587090 PRJNA609258_P_NODE_32061_length_329_cov_1.218750_g31676_i0 PRJNA609258 32061 329 1.21875 4.0096875 Rattus norvegicus 10116 Chordata Chordata 608 1.4599999999999995e-169   NTclustered gi|298911172|emb|FQ229143.1| 10116 g31676 i0 100 53.1063829787234 329 0 100 0 1 329 1032 704 Rattus norvegicus TL0ADA48YP11 mRNA sequence blastn 17472 608 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587092 587092 PRJNA609258_P_NODE_32121_length_329_cov_0.914062_g31736_i0 PRJNA609258 32121 329 0.914062 3.00726398 Rattus norvegicus 10116 Chordata Chordata 608 1.4599999999999995e-169   NTclustered gi|55249782|gb|BC085888.1| 10116 g31736 i0 100 27.4498480243161 329 0 100 0 1 329 2354 2026 Rattus norvegicus similar to chromosome 1 open reading frame 63, mRNA (cDNA clone MGC:94676 IMAGE:7192402), complete cds blastn 9031 608 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587104 587104 PRJNA609258_P_NODE_32521_length_326_cov_1.592885_g32136_i0 PRJNA609258 32521 326 1.592885 5.1928051 Mus musculus 10090 Chordata Chordata 597 3.139999999999999e-166   NTclustered gi|354780906|gb|JN945407.1| 10090 g32136 i0 99.693 19.2239263803681 326 1 100 0 1 326 10650 10325 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Ap4b1:tm1a(EUCOMM)Wtsi; transgenic blastn 6267 597 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587105 587105 PRJNA609258_P_NODE_32541_length_326_cov_1.486166_g32156_i0 PRJNA609258 32541 326 1.486166 4.84490116 Mus musculus 10090 Chordata Chordata 603 6.749999999999998e-168   NTclustered gi|1907176985|ref|XM_011241668.4| 10090 g32156 i0 100 99.079754601227 326 0 100 0 1 326 931 1256 PREDICTED: Mus musculus tripeptidyl peptidase I (Tpp1), transcript variant X1, mRNA blastn 32300 603 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587133 587133 PRJNA609258_P_NODE_33341_length_322_cov_1.253012_g32956_i0 PRJNA609258 33341 322 1.253012 4.03469864 Rattus norvegicus 10116 Chordata Chordata 595 1.1099999999999995e-165   NTclustered gi|290563453|ref|NM_001173339.1| 10116 g32956 i0 100 17.0248447204969 322 0 100 0 1 322 1291 1612 Rattus norvegicus SH3 domain binding glutamate rich protein like 1 (Sh3bgrl1), mRNA blastn 5482 595 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587144 587144 PRJNA609258_P_NODE_3361_length_1036_cov_2.633437_g3118_i0 PRJNA609258 3361 1036 2.633437 27.28240732 Mus musculus 10090 Chordata Chordata 1914 0   NTclustered gi|144922681|ref|NM_011482.4| 10090 g3118 i0 100 74.2316602316602 1036 0 100 0 1 1036 8 1043 Mus musculus SNU13 homolog, small nuclear ribonucleoprotein (U4/U6.U5) (Snu13), mRNA blastn 76904 1914 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587146 587146 PRJNA609258_P_NODE_33661_length_320_cov_2.530364_g33276_i0 PRJNA609258 33661 320 2.530364 8.0971648 Mus musculus 10090 Chordata Chordata 592 1.4299999999999996e-164   NTclustered gi|45768811|gb|BC068132.1| 10090 g33276 i0 100 99.415625 320 0 100 0 1 320 636 955 Mus musculus dolichyl-di-phosphooligosaccharide-protein glycotransferase, mRNA (cDNA clone MGC:93009 IMAGE:6808198), complete cds blastn 31813 592 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587148 587148 PRJNA609258_P_NODE_33701_length_320_cov_1.578947_g33316_i0 PRJNA609258 33701 320 1.578947 5.0526304 Mus musculus 10090 Chordata Chordata 592 1.4299999999999996e-164   NTclustered gi|26347258|dbj|AK078445.1| 10090 g33316 i0 100 56.290625 320 0 100 0 1 320 1029 1348 Mus musculus 12 days embryo male wolffian duct includes surrounding region cDNA, RIKEN full-length enriched library, clone:6720472A06 product:LIM and SH3 protein 1, full insert sequence blastn 18013 592 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587162 587162 PRJNA609258_P_NODE_34061_length_318_cov_1.461224_g33676_i0 PRJNA609258 34061 318 1.461224 4.64669232 Mus musculus 10090 Chordata Chordata 588 1.84e-163   NTclustered gi|111598889|gb|BC090620.1| 10090 g33676 i0 100 75.6132075471698 318 0 100 0 1 318 332 649 Mus musculus proline, glutamic acid and leucine rich protein 1, mRNA (cDNA clone MGC:116580 IMAGE:30699968), complete cds blastn 24045 588 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587184 587184 PRJNA609258_P_NODE_34581_length_315_cov_2.231405_g34196_i0 PRJNA609258 34581 315 2.231405 7.02892575 Mus musculus 10090 Chordata Chordata 582 8.459999999999998e-162   NTclustered gi|20987275|gb|BC029621.1| 10090 g34196 i0 100 28.8380952380952 315 0 100 0 1 315 1560 1246 Mus musculus phosphoribosyl pyrophosphate synthetase-associated protein 1, mRNA (cDNA clone MGC:25626 IMAGE:4208743), complete cds blastn 9084 582 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587254 587254 PRJNA609258_P_NODE_36461_length_306_cov_1.339056_g36076_i0 PRJNA609258 36461 306 1.339056 4.09751136 Mus musculus 10090 Chordata Chordata 562 1.07e-155   NTclustered gi|1907154433|ref|XM_036163743.1| 10090 g36076 i0 100 97.8006535947712 304 0 99 0 1 304 6941 7244 PREDICTED: Mus musculus kinesin family member 1B (Kif1b), transcript variant X8, mRNA blastn 29927 562 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587286 587286 PRJNA609258_P_NODE_37361_length_302_cov_1.039301_g36976_i0 PRJNA609258 37361 302 1.039301 3.13868902 Mus musculus 10090 Chordata Chordata 551 2.2699999999999992e-152   NTclustered gi|1402101519|ref|NM_025436.3| 10090 g36976 i0 99.668 43.2417218543046 301 1 99 0 1 301 8 308 Mus musculus methylsterol monoxygenase 1 (Msmo1), mRNA blastn 13059 551 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587292 587292 PRJNA609258_P_NODE_37481_length_301_cov_1.368421_g37096_i0 PRJNA609258 37481 301 1.368421 4.11894721 Mus musculus 10090 Chordata Chordata 556 4.87e-154   NTclustered gi|84781796|ref|NM_139269.2| 10090 g37096 i0 100 76.7740863787375 301 0 100 0 1 301 345 45 Mus musculus phospholipase A and acyltransferase 3 (Plaat3), transcript variant 1, mRNA blastn 23109 556 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587319 587319 PRJNA609258_P_NODE_38221_length_298_cov_1.204444_g37836_i0 PRJNA609258 38221 298 1.204444 3.58924312 Mus musculus 10090 Chordata Chordata 551 2.239999999999999e-152   NTclustered gi|28175809|gb|BC043032.1| 10090 g37836 i0 100 73.5704697986577 298 0 100 0 1 298 1335 1632 Mus musculus RAD21 homolog (S. pombe), mRNA (cDNA clone MGC:57925 IMAGE:5696540), complete cds blastn 21924 551 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587322 587322 PRJNA609258_P_NODE_38381_length_297_cov_1.392857_g37996_i0 PRJNA609258 38381 297 1.392857 4.13678529 Mus musculus 10090 Chordata Chordata 549 8.029999999999997e-152   NTclustered gi|74204681|dbj|AK159831.1| 10090 g37996 i0 100 22.2693602693603 297 0 100 0 1 297 1304 1600 Mus musculus osteoclast-like cell cDNA, RIKEN full-length enriched library, clone:I420032E22 product:cyclin G1, full insert sequence blastn 6614 549 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587359 587359 PRJNA609258_P_NODE_39261_length_293_cov_1.418182_g38876_i0 PRJNA609258 39261 293 1.418182 4.15527326 Mus musculus 10090 Chordata Chordata 536 6.149999999999998e-148   NTclustered gi|2814874959|ref|NM_175833.3| 10090 g38876 i0 99.659 67.9761092150171 293 1 100 0 1 293 2169 1877 Mus musculus carnitine deficiency-associated gene expressed in ventricle 3 (Cdv3), transcript variant 2, mRNA blastn 19917 536 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587381 587381 PRJNA609258_P_NODE_40041_length_290_cov_1.078341_g39656_i0 PRJNA609258 40041 290 1.078341 3.1271889 Mus musculus 10090 Chordata Chordata 536 6.079999999999999e-148   NTclustered gi|1907080404|ref|XM_030245649.2| 10090 g39656 i0 100 55.8965517241379 290 0 100 0 1 290 4107 4396 PREDICTED: Mus musculus oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide) (Ogdh), transcript variant X6, mRNA blastn 16210 536 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587392 587392 PRJNA609258_P_NODE_40381_length_288_cov_2.781395_g39996_i0 PRJNA609258 40381 288 2.781395 8.0104176 Mus musculus 10090 Chordata Chordata 532 7.8e-147   NTclustered gi|74178400|dbj|AK154249.1| 10090 g39996 i0 100 99.65625 288 0 100 0 1 288 132 419 Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630012B13 product:FKSG20, full insert sequence blastn 28701 532 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587429 587429 PRJNA609258_P_NODE_41581_length_284_cov_0.791469_g41196_i0 PRJNA609258 41581 284 0.791469 2.24777196 Rattus norvegicus 10116 Chordata Chordata 492 1.2999999999999999e-134   NTclustered gi|55716040|gb|BC085680.1| 10116 g41196 i0 97.887 99.6232394366197 284 6 100 0 1 284 3338 3621 Rattus norvegicus pyruvate carboxylase, mRNA (cDNA clone MGC:93035 IMAGE:7109369), complete cds blastn 28293 492 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587457 587457 PRJNA609258_P_NODE_42421_length_280_cov_1.367150_g42036_i0 PRJNA609258 42421 280 1.36715 3.82802 Mus musculus 10090 Chordata Chordata 512 9.85e-141   NTclustered gi|2513039239|ref|NM_001422131.1| 10090 g42036 i0 99.643 97.2821428571429 280 1 100 0 1 280 900 1179 Mus musculus BCL2/adenovirus E1B interacting protein 3-like (Bnip3l), transcript variant 2, mRNA blastn 27239 512 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587470 587470 PRJNA609258_P_NODE_4281_length_940_cov_1.552480_g4002_i0 PRJNA609258 4281 940 1.55248 14.593312 Mus musculus 10090 Chordata Chordata 1703 0   NTclustered gi|12805188|gb|BC002053.1| 10090 g4002 i0 99.362 96.1446808510638 940 6 100 0 1 940 1474 535 Mus musculus capping protein (actin filament) muscle Z-line, beta, mRNA (cDNA clone MGC:6082 IMAGE:3590980), complete cds blastn 90376 1703 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587477 587477 PRJNA609258_P_NODE_43121_length_277_cov_1.504902_g42736_i0 PRJNA609258 43121 277 1.504902 4.16857854 Rattus rattus 10117 Chordata Chordata 460 3.57e-125   NTclustered gi|1820991697|ref|XM_032906154.1| 10117 g42736 i0 96.751 25.0361010830325 277 8 100 1 1 277 4111 4386 PREDICTED: Rattus rattus ANTXR cell adhesion molecule 1 (Antxr1), mRNA blastn 6935 460 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus rattus
587497 587497 PRJNA609258_P_NODE_43621_length_275_cov_1.544554_g43236_i0 PRJNA609258 43621 275 1.544554 4.2475235 Mus musculus 10090 Chordata Chordata 508 1.2499999999999999e-139   NTclustered gi|47078043|gb|AC122204.3| 10090 g43236 i0 100 2 275 0 100 0 1 275 36974 37248 Mus musculus BAC clone RP23-73N8 from chromosome 1, complete sequence blastn 550 508 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587508 587508 PRJNA609258_P_NODE_43881_length_274_cov_1.552239_g43496_i0 PRJNA609258 43881 274 1.552239 4.25313486 Mus musculus 10090 Chordata Chordata 507 4.47e-139   NTclustered gi|22382072|gb|BC026396.1| 10090 g43496 i0 100 83.9197080291971 274 0 100 0 1 274 352 625 Mus musculus resistance to inhibitors of cholinesterase 8 homolog B (C. elegans), mRNA (cDNA clone IMAGE:4206705), with apparent retained intron blastn 22994 507 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587513 587513 PRJNA609258_P_NODE_44081_length_273_cov_1.945000_g43696_i0 PRJNA609258 44081 273 1.945 5.30985 Rattus norvegicus 10116 Chordata Chordata 497 2.68e-136   NTclustered gi|205965|gb|J05206.1|RATPAI1AA 10116 g43696 i0 99.634 25.8827838827839 273 0 100 1 1 273 12654 12383 Rat plasminogen activator inhibitor-1 blastn 7066 497 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587542 587542 PRJNA609258_P_NODE_44841_length_270_cov_1.583756_g44456_i0 PRJNA609258 44841 270 1.583756 4.2761412 Mus musculus 10090 Chordata Chordata 494 3.4199999999999996e-135   NTclustered gi|74186932|dbj|AK037642.1| 10090 g44456 i0 99.63 101.137037037037 270 1 100 0 1 270 1984 1715 Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130032K08 product:unclassifiable, full insert sequence blastn 27307 494 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587550 587550 PRJNA609258_P_NODE_45041_length_269_cov_2.362245_g44656_i0 PRJNA609258 45041 269 2.362245 6.35443905 Mus musculus 10090 Chordata Chordata 497 2.63e-136   NTclustered gi|12834330|dbj|AK003579.1| 10090 g44656 i0 100 83.9925650557621 269 0 100 0 1 269 13 281 Mus musculus 18-day embryo whole body cDNA, RIKEN full-length enriched library, clone:1110008I18 product:RIKEN cDNA 2810432H05 gene, full insert sequence blastn 22594 497 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587567 587567 PRJNA609258_P_NODE_45661_length_267_cov_1.206186_g45276_i0 PRJNA609258 45661 267 1.206186 3.22051662 Xenopus laevis 8355 Chordata Chordata 464 2.6499999999999993e-126   NTclustered gi|62871680|gb|BC090151.1| 8355 g45276 i0 98.127 39.0524344569288 267 3 100 2 1 267 1774 2038 Xenopus laevis cDNA clone MGC:98430 IMAGE:7197786, complete cds blastn 10427 464 1 Eukaryota Opisthokonta Metazoa Chordata Amphibia Anura Pipidae Xenopus Xenopus laevis
587568 587568 PRJNA609258_P_NODE_45721_length_267_cov_1.180412_g45336_i0 PRJNA609258 45721 267 1.180412 3.15170004 Mus musculus 10090 Chordata Chordata 488 1.5699999999999998e-133   NTclustered gi|354782809|gb|JN947310.1| 10090 g45336 i0 99.625 23.5692883895131 267 1 100 0 1 267 1426 1160 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Glud1:tm1a(KOMP)Wtsi; transgenic blastn 6293 488 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587619 587619 PRJNA609258_P_NODE_47161_length_261_cov_1.228723_g46776_i0 PRJNA609258 47161 261 1.228723 3.20696703 Rattus norvegicus 10116 Chordata Chordata 483 7.12e-132   NTclustered gi|2678925431|ref|XM_063279493.1| 10116 g46776 i0 100 98.2413793103448 261 0 100 0 1 261 2079 1819 PREDICTED: Rattus norvegicus prolyl 4-hydroxylase subunit alpha 1 (P4ha1), transcript variant X3, mRNA blastn 25641 483 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587624 587624 PRJNA609258_P_NODE_47281_length_260_cov_1.663102_g46896_i0 PRJNA609258 47281 260 1.663102 4.3240652 Mus musculus 10090 Chordata Chordata 481 2.55e-131   NTclustered gi|12847440|dbj|AK011365.1| 10090 g46896 i0 100 98.0769230769231 260 0 100 0 1 260 774 515 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610009M20 product:weakly similar to AU-BINDING PROTEIN/ENOYL-COA HYDRATASE [Homo sapiens], full insert sequence blastn 25500 481 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587632 587632 PRJNA609258_P_NODE_47621_length_259_cov_1.258065_g47236_i0 PRJNA609258 47621 259 1.258065 3.25838835 Rattus norvegicus 10116 Chordata Chordata 473 4.25e-129   NTclustered gi|2007536431|ref|NM_153308.5| 10116 g47236 i0 99.614 48.2586872586873 259 1 100 0 1 259 1470 1212 Rattus norvegicus glutamate ionotropic receptor NMDA type subunit associated protein 1 (Grina), mRNA blastn 12499 473 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587653 587653 PRJNA609258_P_NODE_48221_length_257_cov_1.271739_g47836_i0 PRJNA609258 48221 257 1.271739 3.26836923 Mus musculus 10090 Chordata Chordata 475 1.1699999999999999e-129   NTclustered gi|2463694811|ref|NM_001418622.1| 10090 g47836 i0 100 20.0428015564202 257 0 100 0 1 257 1540 1796 Mus musculus thyroid hormone receptor interactor 13 (Trip13), transcript variant 2, mRNA blastn 5151 475 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587676 587676 PRJNA609258_P_NODE_48901_length_254_cov_1.624309_g48516_i0 PRJNA609258 48901 254 1.624309 4.12574486 Mus musculus 10090 Chordata Chordata 462 8.989999999999999e-126   NTclustered gi|76683103|gb|AC158554.6| 10090 g48516 i0 99.605 28.4251968503937 253 1 99 0 1 253 147329 147077 Mus musculus chromosome 15, clone RP23-353O17, complete sequence blastn 7220 462 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587691 587691 PRJNA609258_P_NODE_49401_length_253_cov_0.866667_g49016_i0 PRJNA609258 49401 253 0.866667 2.19266751 Mus musculus 10090 Chordata Chordata 468 1.92e-127   NTclustered gi|2211362193|ref|NM_001402910.1| 10090 g49016 i0 100 10.9249011857708 253 0 100 0 1 253 6679 6427 Mus musculus SR-related CTD-associated factor 11 (Scaf11), transcript variant 2, mRNA blastn 2764 468 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587693 587693 PRJNA609258_P_NODE_49421_length_253_cov_0.866667_g49036_i0 PRJNA609258 49421 253 0.866667 2.19266751 Mus musculus 10090 Chordata Chordata 468 1.92e-127   NTclustered gi|21844711|gb|AC098889.3| 10090 g49036 i0 100 2 253 0 100 0 1 253 70874 70622 Mus musculus BAC clone RP23-122O10 from 10, complete sequence blastn 506 468 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587694 587694 PRJNA609258_P_NODE_49441_length_253_cov_0.866667_g49056_i0 PRJNA609258 49441 253 0.866667 2.19266751 Mus musculus 10090 Chordata Chordata 468 1.92e-127   NTclustered gi|74151440|dbj|AK166532.1| 10090 g49056 i0 100 89.6679841897233 253 0 100 0 1 253 1677 1425 Mus musculus 1 cell embryo 1 cell cDNA, RIKEN full-length enriched library, clone:I0C0002C23 product:spindlin, full insert sequence blastn 22686 468 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587699 587699 PRJNA609258_P_NODE_49581_length_253_cov_0.866667_g49196_i0 PRJNA609258 49581 253 0.866667 2.19266751 Mus musculus 10090 Chordata Chordata 457 4.16e-124   NTclustered gi|84619783|gb|AC174646.2| 10090 g49196 i0 99.209 12.2569169960474 253 2 100 0 1 253 56224 55972 Mus musculus BAC clone RP23-9P6 from chromosome 9, complete sequence blastn 3101 457 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587703 587703 PRJNA609258_P_NODE_49681_length_253_cov_0.866667_g49296_i0 PRJNA609258 49681 253 0.866667 2.19266751 Rattus norvegicus 10116 Chordata Chordata 468 1.92e-127   NTclustered gi|25244409|gb|AY149995.1| 10116 g49296 i0 100 99.6442687747036 253 0 100 0 1 253 658 910 Rattus norvegicus complement component C4 mRNA, complete cds blastn 25210 468 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587707 587707 PRJNA609258_P_NODE_49841_length_253_cov_0.866667_g49456_i0 PRJNA609258 49841 253 0.866667 2.19266751 Mus musculus 10090 Chordata Chordata 462 8.95e-126   NTclustered gi|55368825|gb|AC102611.10| 10090 g49456 i0 99.606 3.14624505928854 254 0 100 1 1 253 193308 193561 Mus musculus chromosome 1, clone RP23-416O18, complete sequence blastn 796 462 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587708 587708 PRJNA609258_P_NODE_49861_length_253_cov_0.866667_g49476_i0 PRJNA609258 49861 253 0.866667 2.19266751 Rattus rattus 10117 Chordata Chordata 460 3.2199999999999996e-125   NTclustered gi|1820990606|ref|XM_032905567.1| 10117 g49476 i0 99.603 46.3478260869565 252 1 99 0 2 253 319 68 PREDICTED: Rattus rattus GABA type A receptor associated protein like 1 (Gabarapl1), mRNA blastn 11726 460 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus rattus
587723 587723 PRJNA609258_P_NODE_50221_length_252_cov_1.301676_g49836_i0 PRJNA609258 50221 252 1.301676 3.28022352 Mus musculus 10090 Chordata Chordata 466 6.89e-127   NTclustered gi|21619334|gb|BC031847.1| 10090 g49836 i0 100 99.6309523809524 252 0 100 0 1 252 2453 2202 Mus musculus nuclear VCP-like, mRNA (cDNA clone MGC:25549 IMAGE:3964470), complete cds blastn 25107 466 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587729 587729 PRJNA609258_P_NODE_50341_length_252_cov_0.871508_g49956_i0 PRJNA609258 50341 252 0.871508 2.19620016 Mus musculus 10090 Chordata Chordata 466 6.89e-127   NTclustered gi|1720371849|ref|XM_006515877.3| 10090 g49956 i0 100 99.6825396825397 252 0 100 0 1 252 2439 2188 PREDICTED: Mus musculus pleckstrin homology domain containing, family G (with RhoGef domain) member 3 (Plekhg3), transcript variant X9, mRNA blastn 25120 466 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587741 587741 PRJNA609258_P_NODE_50661_length_252_cov_0.871508_g50276_i0 PRJNA609258 50661 252 0.871508 2.19620016 Rattus norvegicus 10116 Chordata Chordata 466 6.89e-127   NTclustered gi|2678925405|ref|XM_039099046.2| 10116 g50276 i0 100 77.984126984127 252 0 100 0 1 252 895 644 PREDICTED: Rattus norvegicus serglycin (Srgn), transcript variant X1, mRNA blastn 19652 466 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587743 587743 PRJNA609258_P_NODE_50741_length_252_cov_0.871508_g50356_i0 PRJNA609258 50741 252 0.871508 2.19620016 Rattus norvegicus 10116 Chordata Chordata 466 6.89e-127   NTclustered gi|2678863731|ref|XM_008759500.3| 10116 g50356 i0 100 45.6507936507937 252 0 100 0 1 252 11207 11458 PREDICTED: Rattus norvegicus insulin-like growth factor 1 receptor (Igf1r), transcript variant X1, mRNA blastn 11504 466 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587745 587745 PRJNA609258_P_NODE_50841_length_252_cov_0.871508_g50456_i0 PRJNA609258 50841 252 0.871508 2.19620016 Mus musculus 10090 Chordata Chordata 316 7.34e-82   NTclustered gi|28949302|emb|BX248578.6| 10090 g50456 i0 100 2.03174603174603 171 0 100 0 82 252 39335 39505 Mouse DNA sequence from clone RP23-227K23 on chromosome 11, complete sequence blastn 512 316 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587751 587751 PRJNA609258_P_NODE_51061_length_251_cov_1.314607_g50676_i0 PRJNA609258 51061 251 1.314607 3.29966357 Mus musculus 10090 Chordata Chordata 462 8.869999999999999e-126   NTclustered gi|74217046|dbj|AK145748.1| 10090 g50676 i0 100 75.6892430278885 250 0 99 0 2 251 2285 2036 Mus musculus blastocyst blastocyst cDNA, RIKEN full-length enriched library, clone:I1C0037I23 product:GLE1 RNA export mediator-like (yeast, full insert sequence blastn 18998 462 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587759 587759 PRJNA609258_P_NODE_51241_length_251_cov_0.876404_g50856_i0 PRJNA609258 51241 251 0.876404 2.19977404 Rattus norvegicus 10116 Chordata Chordata 464 2.47e-126   NTclustered gi|584277017|ref|NM_147210.2| 10116 g50856 i0 100 8.78884462151394 251 0 100 0 1 251 4355 4105 Rattus norvegicus nuclear receptor subfamily 1, group D, member 2 (Nr1d2), mRNA blastn 2206 464 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587761 587761 PRJNA609258_P_NODE_51281_length_251_cov_0.876404_g50896_i0 PRJNA609258 51281 251 0.876404 2.19977404 Mus musculus 10090 Chordata Chordata 464 2.47e-126   NTclustered gi|26086449|dbj|AK038313.1| 10090 g50896 i0 100 99.8127490039841 251 0 100 0 1 251 2766 2516 Mus musculus 16 days neonate thymus cDNA, RIKEN full-length enriched library, clone:A130095C24 product:EXOSOME COMPLEX EXONUCLEASE RRP44 (EC 3.1.13.-) (RIBOSOMAL RNA PROCESSING PROTEIN 44) (DIS3 PROTEIN HOMOLOG) homolog [Homo sapiens], full insert sequence blastn 25053 464 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587765 587765 PRJNA609258_P_NODE_51461_length_251_cov_0.876404_g51076_i0 PRJNA609258 51461 251 0.876404 2.19977404 Mus musculus 10090 Chordata Chordata 464 2.47e-126   NTclustered gi|12848728|dbj|AK012158.1| 10090 g51076 i0 100 97.0358565737052 251 0 100 0 1 251 273 523 Mus musculus 10 days embryo whole body cDNA, RIKEN full-length enriched library, clone:2610528A15 product:weakly similar to PUTATIVE HELICASE W08D2.7 (EC 3.6.1.-) [Caenorhabditis elegans], full insert sequence blastn 24356 464 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587770 587770 PRJNA609258_P_NODE_51661_length_251_cov_0.876404_g51276_i0 PRJNA609258 51661 251 0.876404 2.19977404 Grammomys surdaster 491861 Chordata Chordata 239 1.6300000000000002e-58   NTclustered gi|1621910910|ref|XM_028761262.1| 491861 g51276 i0 85.356 19.3426294820717 239 25 94 8 1 235 5642 5410 PREDICTED: Grammomys surdaster G protein subunit alpha 13 (Gna13), transcript variant X1, mRNA blastn 4855 239 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Grammomys Grammomys surdaster
587777 587777 PRJNA609258_P_NODE_51901_length_251_cov_0.865169_g51516_i0 PRJNA609258 51901 251 0.865169 2.17157419 Mus musculus 10090 Chordata Chordata 464 2.47e-126   NTclustered gi|29477136|gb|BC048396.1| 10090 g51516 i0 100 90.390438247012 251 0 100 0 1 251 484 234 Mus musculus cDNA clone IMAGE:6395307, containing frame-shift errors blastn 22688 464 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587784 587784 PRJNA609258_P_NODE_52061_length_250_cov_1.322034_g51676_i0 PRJNA609258 52061 250 1.322034 3.305085 Mus musculus 10090 Chordata Chordata 462 8.83e-126   NTclustered gi|145279238|ref|NM_134134.2| 10090 g51676 i0 100 100.1 250 0 100 0 1 250 2327 2078 Mus musculus HMG box domain containing 3 (Hmgxb3), transcript variant 2, mRNA blastn 25025 462 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587817 587817 PRJNA609258_P_NODE_53101_length_249_cov_0.886364_g52716_i0 PRJNA609258 53101 249 0.886364 2.20704636 Rattus norvegicus 10116 Chordata Chordata 460 3.16e-125   NTclustered gi|2678950842|ref|XM_039112027.2| 10116 g52716 i0 100 99.9598393574297 249 0 100 0 1 249 968 1216 PREDICTED: Rattus norvegicus coenzyme Q6 monooxygenase (Coq6), transcript variant X2, mRNA blastn 24890 460 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587823 587823 PRJNA609258_P_NODE_53341_length_249_cov_0.886364_g52956_i0 PRJNA609258 53341 249 0.886364 2.20704636 Mus musculus 10090 Chordata Chordata 442 1.1399999999999995e-119   NTclustered gi|354797941|gb|JN962442.1| 10090 g52956 i0 98.79 12.3734939759036 248 3 99 0 2 249 31310 31063 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Stard4:tm1a(KOMP)Wtsi; transgenic blastn 3081 442 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587831 587831 PRJNA609258_P_NODE_53681_length_249_cov_0.886364_g53296_i0 PRJNA609258 53681 249 0.886364 2.20704636 Mus musculus 10090 Chordata Chordata 449 6.840000000000001e-122   NTclustered gi|1907097911|ref|XR_383122.5| 10090 g53296 i0 99.197 74.0240963855422 249 2 100 0 1 249 1560 1808 PREDICTED: Mus musculus Brca1 associated protein 1 (Bap1), transcript variant X2, misc_RNA blastn 18432 449 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587835 587835 PRJNA609258_P_NODE_53761_length_249_cov_0.886364_g53376_i0 PRJNA609258 53761 249 0.886364 2.20704636 Mus musculus 10090 Chordata Chordata 460 3.16e-125   NTclustered gi|28386259|gb|BC044759.2| 10090 g53376 i0 100 23.5180722891566 249 0 100 0 1 249 880 632 Mus musculus progesterone receptor membrane component 2, mRNA (cDNA clone IMAGE:5061936), partial cds blastn 5856 460 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587842 587842 PRJNA609258_P_NODE_53941_length_248_cov_1.337143_g53556_i0 PRJNA609258 53941 248 1.337143 3.31611464 Mus musculus 10090 Chordata Chordata 459 1.13e-124   NTclustered gi|1907080175|ref|XM_006514542.5| 10090 g53556 i0 100 28.0645161290323 248 0 100 0 1 248 3494 3247 PREDICTED: Mus musculus leukemia inhibitory factor (Lif), transcript variant X1, mRNA blastn 6960 459 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587856 587856 PRJNA609258_P_NODE_54281_length_248_cov_0.891429_g53896_i0 PRJNA609258 54281 248 0.891429 2.21074392 Mus musculus 10090 Chordata Chordata 459 1.13e-124   NTclustered gi|354790548|gb|JN955049.1| 10090 g53896 i0 100 12.9314516129032 248 0 100 0 1 248 28596 28349 Mus musculus targeted KO-first, conditional ready, lacZ-tagged mutant allele Cldn27:tm1a(KOMP)Wtsi; transgenic blastn 3207 459 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587857 587857 PRJNA609258_P_NODE_54321_length_248_cov_0.891429_g53936_i0 PRJNA609258 54321 248 0.891429 2.21074392 Mus musculus 10090 Chordata Chordata 448 2.4499999999999996e-121   NTclustered gi|1781907526|ref|NM_027350.4| 10090 g53936 i0 99.194 18 248 2 100 0 1 248 2316 2069 Mus musculus asparaginyl-tRNA synthetase 1 (Nars1), transcript variant 2, mRNA blastn 4464 448 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587865 587865 PRJNA609258_P_NODE_54541_length_248_cov_0.891429_g54156_i0 PRJNA609258 54541 248 0.891429 2.21074392 Mus musculus 10090 Chordata Chordata 459 1.13e-124   NTclustered gi|57544807|gb|AC155254.1| 10090 g54156 i0 100 1 248 0 100 0 1 248 100490 100243 Mus musculus BAC clone RP24-174G4 from 16, complete sequence blastn 248 459 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587867 587867 PRJNA609258_P_NODE_54601_length_248_cov_0.891429_g54216_i0 PRJNA609258 54601 248 0.891429 2.21074392 Mus musculus 10090 Chordata Chordata 459 1.13e-124   NTclustered gi|294774580|ref|NM_001177565.1| 10090 g54216 i0 100 64.6048387096774 248 0 100 0 1 248 1196 949 Mus musculus eukaryotic translation initiation factor 1A domain containing 8 (Eif1ad8), mRNA blastn 16022 459 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587869 587869 PRJNA609258_P_NODE_54721_length_248_cov_0.891429_g54336_i0 PRJNA609258 54721 248 0.891429 2.21074392 Rattus norvegicus 10116 Chordata Chordata 453 5.2600000000000005e-123   NTclustered gi|3323606|gb|AF061947.1|AF061947 10116 g54336 i0 99.597 100.040322580645 248 1 100 0 1 248 5462 5709 Rattus norvegicus cain mRNA, complete cds blastn 24810 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587873 587873 PRJNA609258_P_NODE_54821_length_247_cov_1.793103_g54436_i0 PRJNA609258 54821 247 1.793103 4.42896441 Mus musculus 10090 Chordata Chordata 453 5.2400000000000005e-123   NTclustered gi|354795259|gb|JN959760.1| 10090 g54436 i0 100 94.6194331983806 245 0 99 0 1 245 5173 5417 Mus musculus targeted non-conditional, lacZ-tagged mutant allele Zfp954:tm1e(EUCOMM)Wtsi; transgenic blastn 23371 453 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587882 587882 PRJNA609258_P_NODE_55061_length_247_cov_0.896552_g54676_i0 PRJNA609258 55061 247 0.896552 2.21448344 Rattus norvegicus 10116 Chordata Chordata 342 1.1799999999999997e-89   NTclustered gi|66730540|ref|NM_001024368.1| 10116 g54676 i0 99.468 37.9433198380567 188 1 91 0 60 247 33 220 Rattus norvegicus solute carrier family 10, member 3 (Slc10a3), mRNA blastn 9372 342 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587885 587885 PRJNA609258_P_NODE_55221_length_247_cov_0.896552_g54836_i0 PRJNA609258 55221 247 0.896552 2.21448344 Mus musculus 10090 Chordata Chordata 457 4.05e-124   NTclustered gi|1720356146|ref|XR_003956213.1| 10090 g54836 i0 100 93.3198380566802 247 0 100 0 1 247 788 542 PREDICTED: Mus musculus selenocysteine lyase (Scly), transcript variant X8, misc_RNA blastn 23050 457 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587891 587891 PRJNA609258_P_NODE_55541_length_247_cov_0.896552_g55156_i0 PRJNA609258 55541 247 0.896552 2.21448344 Rattus norvegicus 10116 Chordata Chordata 455 1.4600000000000002e-123   NTclustered gi|197246115|gb|BC169047.1| 10116 g55156 i0 100 60.5465587044534 246 0 99 0 2 247 1328 1083 Rattus norvegicus PTEN induced putative kinase 1, mRNA (cDNA clone MGC:189438 IMAGE:7190543), complete cds blastn 14955 455 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Rattus Rattus norvegicus
587892 587892 PRJNA609258_P_NODE_55561_length_247_cov_0.896552_g55176_i0 PRJNA609258 55561 247 0.896552 2.21448344 Mus musculus 10090 Chordata Chordata 457 4.05e-124   NTclustered gi|25139951|gb|AC133573.11| 10090 g55176 i0 100 86.0971659919028 247 0 100 0 1 247 21260 21506 Mus musculus strain C57BL/6J clone rp23-139f17, complete sequence blastn 21266 457 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus
587903 587903 PRJNA609258_P_NODE_55841_length_246_cov_1.352601_g55456_i0 PRJNA609258 55841 246 1.352601 3.32739846 Cairina moschata 8855 Chordata Chordata 52.8 0.022   NTclustered gi|2921976312|gb|CP130421.1| 8855 g55456 i0 100 0.113821138211382 28 0 11 0 104 131 28827624 28827651 Cairina moschata breed yongchun chromosome 6 blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Chordata Aves Anseriformes Anatidae Cairina Cairina moschata
587922 587922 PRJNA609258_P_NODE_56441_length_246_cov_0.901734_g56056_i0 PRJNA609258 56441 246 0.901734 2.21826564 Mus musculus 10090 Chordata Chordata 455 1.4500000000000002e-123   NTclustered gi|28175131|gb|BC045194.1| 10090 g56056 i0 100 68.260162601626 246 0 100 0 1 246 753 998 Mus musculus epoxide hydrolase 1, microsomal, mRNA (cDNA clone MGC:49074 IMAGE:4986422), complete cds blastn 16792 455 1 Eukaryota Opisthokonta Metazoa Chordata Mammalia Rodentia Muridae Mus Mus musculus

Next page

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;