RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA609258", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA609258 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10792059 10792059 PRJNA609258_P_NODE_54189_length_248_cov_0.891429_g53804_i0 PRJNA609258 54189 248 0.891429 2.21074392 Halteromyces radiatus 101107 Fungi Fungi 172 1.6499999999999999e-38   NTclustered gi|2323725066|ref|XM_051541399.1| 101107 g53804 i0 80.172 8.36290322580645 232 44 93 2 1 231 696 466 Halteromyces radiatus adenosylhomocysteinase (BX664DRAFT_278257), mRNA blastn 2074 172 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Cunninghamellaceae Halteromyces Halteromyces radiatus
18998746 18998746 PRJNA609258_P_NODE_51615_length_251_cov_0.876404_g51230_i0 PRJNA609258 51615 251 0.876404 2.19977404 Mucorales 4827 Fungi Fungi 292 1.2299999999999999e-74   NTclustered gi|2323727332|ref|XM_051577108.1| 101096 g51230 i0 87.649 4.69322709163347 251 31 100 0 1 251 2769 2519 Gilbertella persicaria P-loop containing nucleoside triphosphate hydrolase protein (B0P05DRAFT_532587), mRNA blastn 1178 292 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;