RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA609258" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 6 ✖

bioproject 1

  • PRJNA609258 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1147333 1147333 PRJNA609258_P_NODE_30961_length_335_cov_1.870229_g30576_i0 PRJNA609258 30961 335 1.870229 6.26526715 Arthronema 241432 Bacteria Bacteria 619 6.91e-173   NTclustered gi|664803861|gb|KM019974.1| 241439 g30576 i0 100 100.731343283582 335 0 100 0 1 335 512 846 Arthronema africanum SAG 12.89 16S ribosomal RNA gene, partial sequence blastn 33745 619 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Leptolyngbyales Leptolyngbyaceae Arthronema Arthronema africanum
4415451 4415451 PRJNA609258_P_NODE_54404_length_248_cov_0.891429_g54019_i0 PRJNA609258 54404 248 0.891429 2.21074392 Cylindrospermopsis 77021 Bacteria Bacteria 52.8 1.19e-5   NR WP_218773708.1 77022 g54019 i0 39 3.95564516129032 82 45 96.8 2 7 246 448 526 WP_218773708.1 beta strand repeat-containing protein [Cylindrospermopsis raciborskii] diamond 981 53.1 0.994350282485876 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Aphanizomenonaceae Cylindrospermopsis Cylindrospermopsis raciborskii
10791023 10791023 PRJNA609258_P_NODE_24809_length_379_cov_0.866013_g24425_i0 PRJNA609258 24809 379 0.866013 3.28218927 uncultured Chroococcidiopsis sp. 259957 Bacteria Bacteria 494 4.99e-135   NTclustered gi|225696254|gb|FJ805921.1| 259957 g24425 i0 90.86 107.071240105541 372 29 98 4 2 371 3103 2735 Uncultured Chroococcidiopsis sp. clone SA1_1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 40580 494 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis uncultured Chroococcidiopsis sp.
15890341 15890341 PRJNA609258_P_NODE_40753_length_287_cov_1.144860_g40368_i0 PRJNA609258 40753 287 1.14486 3.2857482 Scytonema hofmannii 34078 Bacteria Bacteria 453 6.23e-123   NTclustered gi|146740650|emb|AM709637.1| 128403 g40368 i0 95.139 191.376306620209 288 13 100 1 1 287 2693 2406 Scytonema hofmanni PCC 7110 partial ribosomal RNA operon, strain PCC 7110 blastn 54925 453 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Scytonemataceae Scytonema Scytonema hofmannii
18998664 18998664 PRJNA609258_P_NODE_2815_length_1113_cov_1.704808_g2596_i0 PRJNA609258 2815 1113 1.704808 18.97451304 Cyanophyceae 3028117 Bacteria Bacteria 1520 0   NTclustered gi|225696255|gb|FJ805922.1| 259957 g2596 i0 91.413 176.274034141959 1118 82 100 11 1 1113 1859 2967 Uncultured Chroococcidiopsis sp. clone SA2_1 16S ribosomal RNA gene, partial sequence; 16S-23S ribosomal RNA intergenic spacer, complete sequence; and 23S ribosomal RNA gene, partial sequence blastn 196193 1520 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Chroococcidiopsidales Chroococcidiopsidaceae Chroococcidiopsis uncultured Chroococcidiopsis sp.
30648605 30648605 PRJNA609258_P_NODE_32573_length_326_cov_1.233202_g32188_i0 PRJNA609258 32573 326 1.233202 4.02023852 Anabaenopsis elenkinii 156213 Bacteria Bacteria 43.5 0.0476   NR WP_200989542.1 156213 g32188 i0 32 0.690184049079755 75 45 66.3 3 35 250 252 323 WP_200989542.1 fatty acid desaturase [Anabaenopsis elenkinii] diamond 225 43.5 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota Cyanophyceae Nostocales Nodulariaceae Anabaenopsis Anabaenopsis elenkinii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;