contig_metadata
9 rows where bioproject = "PRJNA608894" and tax_phylum = "Verrucomicrobiota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 585894 | 585894 | PRJNA608894_P_NODE_7061_length_1058_cov_4.724873_g6674_i0 | PRJNA608894 | 7061 | 1058 | 4.724873 | 49.98915634 | Chthoniobacter sp. | 2510640 | Bacteria | Bacteria | 556 | 9.869999999999999e-196 | NR | MDR3405335.1 | 2510640 | g6674 | i0 | 85.3 | 0.870510396975425 | 307 | 45 | 87.1 | 0 | 1057 | 137 | 158 | 464 | MDR3405335.1 translation elongation factor EF1A family protein [Chthoniobacter sp.] | diamond | 921 | 556 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter sp. | |
| 4975174 | 4975174 | PRJNA608894_P_NODE_21364_length_432_cov_4.440111_g20868_i0 | PRJNA608894 | 21364 | 432 | 4.440111 | 19.18127952 | Prosthecobacter | 48463 | Bacteria | Bacteria | 776 | 0 | NTclustered | gi|12583974|gb|AF245378.1|AF245378 | 48464 | g20868 | i0 | 99.074 | 241.659722222222 | 432 | 4 | 100 | 0 | 1 | 432 | 190 | 621 | Prosthecobacter fusiformis 23S ribosomal RNA gene, partial sequence | blastn | 104397 | 776 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Prosthecobacter | Prosthecobacter fusiformis | |
| 13339546 | 13339546 | PRJNA608894_P_NODE_37271_length_294_cov_1.619910_g36772_i0 | PRJNA608894 | 37271 | 294 | 1.61991 | 4.7625354 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 156 | 1.3499999999999997e-42 | NR | OUU59431.1 | 1986793 | g36772 | i0 | 73.2 | 11.8571428571429 | 97 | 26 | 99 | 0 | 2 | 292 | 417 | 513 | OUU59431.1 MAG: glycine dehydrogenase (aminomethyl-transferring), partial [Verrucomicrobia bacterium TMED60] | diamond | 3486 | 156 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobia bacterium TMED60 | |||||
| 19711899 | 19711899 | PRJNA608894_P_NODE_30896_length_329_cov_0.898438_g30397_i0 | PRJNA608894 | 30896 | 329 | 0.898438 | 2.95586102 | Verrucomicrobiaceae bacterium | 2026800 | Bacteria | Bacteria | 171 | 5.39e-50 | NR | RYD65414.1 | 2026800 | g30397 | i0 | 77.2 | 0.9209726443769 | 101 | 23 | 92.1 | 0 | 3 | 305 | 235 | 335 | RYD65414.1 MAG: hypothetical protein EOP84_31955 [Verrucomicrobiaceae bacterium] | diamond | 303 | 171 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Verrucomicrobiaceae bacterium | ||
| 26840393 | 26840393 | PRJNA608894_P_NODE_55441_length_245_cov_2.232558_g54942_i0 | PRJNA608894 | 55441 | 245 | 2.232558 | 5.4697671 | Bacteria | 2 | Bacteria | Bacteria | 47.4 | 8.69e-4 | NR | PYI86484.1 | 2026799 | g54942 | i0 | 36.7 | 2.90204081632653 | 79 | 45 | 95.5 | 2 | 234 | 1 | 38 | 112 | PYI86484.1 MAG: succinate-semialdehyde dehydrogenase (NADP(+)), partial [Verrucomicrobiota bacterium] | diamond | 711 | 47.8 | 0.99163179916318 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 29605999 | 29605999 | PRJNA608894_P_NODE_43590_length_270_cov_2.340102_g43091_i0 | PRJNA608894 | 43590 | 270 | 2.340102 | 6.3182754 | Persicirhabdus sediminis | 454144 | Bacteria | Bacteria | 43.9 | 0.0199 | NR | WP_200312416.1 | 454144 | g43091 | i0 | 48.9 | 0.5 | 45 | 20 | 47.8 | 3 | 256 | 128 | 377 | 420 | WP_200312416.1 membrane protein insertase YidC [Persicirhabdus sediminis] | diamond | 135 | 43.9 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Persicirhabdus | Persicirhabdus sediminis | |
| 30648583 | 30648583 | PRJNA608894_P_NODE_14033_length_603_cov_3.281132_g13551_i0 | PRJNA608894 | 14033 | 603 | 3.281132 | 19.785225959999998 | Chthoniobacterales bacterium | 2201154 | Bacteria | Bacteria | 87 | 3.5e-17 | NR | MEO5753320.1 | 2201154 | g13551 | i0 | 30.2 | 0.955223880597015 | 192 | 106 | 87.6 | 6 | 535 | 8 | 34 | 213 | MEO5753320.1 CAP domain-containing protein [Chthoniobacterales bacterium] | diamond | 576 | 87 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacterales bacterium | |||
| 31198648 | 31198648 | PRJNA608894_P_NODE_55355_length_246_cov_0.884393_g54856_i0 | PRJNA608894 | 55355 | 246 | 0.884393 | 2.17560678 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 87.8 | 7.46e-20 | NR | NBV85467.1 | 2026799 | g54856 | i0 | 54.2 | 3.01219512195122 | 83 | 37 | 100 | 1 | 1 | 246 | 56 | 138 | NBV85467.1 L,D-transpeptidase [Verrucomicrobiota bacterium] | diamond | 741 | 87.8 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiota bacterium | |||||
| 31344136 | 31344136 | PRJNA608894_P_NODE_43536_length_271_cov_1.040404_g43037_i0 | PRJNA608894 | 43536 | 271 | 1.040404 | 2.81949484 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 60.1 | 4.12e-8 | NR | HYG84357.1 | 2499141 | g43037 | i0 | 50.7 | 0.74169741697417 | 67 | 33 | 74.2 | 0 | 270 | 70 | 231 | 297 | HYG84357.1 hypothetical protein [Verrucomicrobiia bacterium] | diamond | 201 | 60.1 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;