RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA608894", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA608894 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8238095 8238095 PRJNA608894_P_NODE_15087_length_568_cov_2.795960_g14598_i0 PRJNA608894 15087 568 2.79596 15.8810528 brine shrimp arlivirus 7 2900382 Viruses Viruses 955 0   NTclustered gi|2209095168|gb|OL472412.1| 2900382 g14598 i0 96.593 1.03345070422535 587 1 100 2 1 568 4246 4832 MAG: Brine shrimp arlivirus 7 isolate XZ/98-19 hypothetical protein, RNA-dependent RNA polymerase, and hypothetical protein genes, complete cds blastn 587 955 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Lispiviridae Arlivirus brine shrimp arlivirus 7
8238386 8238386 PRJNA608894_P_NODE_29147_length_342_cov_4.918216_g28648_i0 PRJNA608894 29147 342 4.918216 16.82029872 brine shrimp yue-like virus 3 2900455 Viruses Viruses 621 1.9599999999999997e-173   NTclustered gi|2209095234|gb|OL472819.1| 2900455 g28648 i0 99.415 10.0058479532164 342 2 100 0 1 342 18 359 MAG: Brine shrimp yue-like virus 3 isolate SH/98 segment 2 hypothetical protein gene, complete cds blastn 3422 621 1 Viruses   Orthornavirae Negarnaviricota Yunchangviricetes Goujianvirales Yueviridae   brine shrimp yue-like virus 3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;