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contig_metadata

11 rows where bioproject = "PRJNA608894", tax_phylum = "Myxococcota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 11 ✖

tax_phylum 1

  • Myxococcota · 11 ✖

tax_kingdom 1

bioproject 1

  • PRJNA608894 · 11 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4412989 4412989 PRJNA608894_P_NODE_34864_length_306_cov_1.905579_g34365_i0 PRJNA608894 34864 306 1.905579 5.83107174 Sorangium cellulosum 56 Bacteria Bacteria 52.8 0.029   NTclustered gi|1338588479|gb|CP012673.1| 56 g34365 i0 100 0.0915032679738562 28 0 9 0 279 306 5780255 5780228 Sorangium cellulosum strain So ce26 chromosome, complete genome blastn 28 52.8 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Sorangium Sorangium cellulosum
5689601 5689601 PRJNA608894_P_NODE_61705_length_229_cov_2.217949_g61206_i0 PRJNA608894 61705 229 2.217949 5.07910321 Haliangium ochraceum 80816 Bacteria Bacteria 128 3.3e-25   NTclustered gi|262076673|gb|CP001804.1| 502025 g61206 i0 82.639 20.2838427947598 144 25 63 0 22 165 9394911 9394768 Haliangium ochraceum DSM 14365, complete genome blastn 4645 128 1 Bacteria   Pseudomonadati Myxococcota   Haliangiales Kofleriaceae Haliangium Haliangium ochraceum
20988023 20988023 PRJNA608894_P_NODE_50017_length_251_cov_0.865169_g49518_i0 PRJNA608894 50017 251 0.865169 2.17157419 Corallococcus coralloides 184914 Bacteria Bacteria 52.8 0.023   NTclustered gi|2851136330|gb|CP172866.1| 184914 g49518 i0 100 0.111553784860558 28 0 11 0 218 245 9558830 9558803 Corallococcus coralloides strain KYC2213 chromosome, complete genome blastn 28 52.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales Myxococcaceae Corallococcus Corallococcus coralloides
27238120 27238120 PRJNA608894_P_NODE_50943_length_250_cov_0.870056_g50444_i0 PRJNA608894 50943 250 0.870056 2.17514 Myxococcales bacterium 2026763 Bacteria Bacteria 80.1 1.62e-15   NR MDB4968223.1 2026763 g50444 i0 43.9 4.368 82 43 98.4 1 249 4 196 274 MDB4968223.1 smt1 [Myxococcales bacterium] diamond 1092 80.1 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
27838062 27838062 PRJNA608894_P_NODE_55084_length_246_cov_0.890173_g54585_i0 PRJNA608894 55084 246 0.890173 2.18982558 Myxococcales bacterium 2026763 Bacteria Bacteria 42.4 0.0484   NR MBK9035037.1 2026763 g54585 i0 36.6 0.865853658536585 71 42 86.6 1 29 241 191 258 MBK9035037.1 DUF72 domain-containing protein [Myxococcales bacterium] diamond 213 42.4 1 Bacteria   Pseudomonadati Myxococcota Myxococcia Myxococcales     Myxococcales bacterium
29196048 29196048 PRJNA608894_P_NODE_37949_length_291_cov_1.178899_g37450_i0 PRJNA608894 37949 291 1.178899 3.43059609 Chondromyces crocatus 52 Bacteria Bacteria 70.1 1.72e-12   NR WP_050434971.1 52 g37450 i0 65.9 0.45360824742268 44 15 45.4 0 10 141 128 171 WP_050434971.1 peptidylprolyl isomerase [Chondromyces crocatus] diamond 132 70.1 1 Bacteria   Pseudomonadati Myxococcota   Polyangiales Polyangiaceae Chondromyces Chondromyces crocatus
30206261 30206261 PRJNA608894_P_NODE_53592_length_247_cov_1.586207_g53093_i0 PRJNA608894 53592 247 1.586207 3.91793129 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 40.8 0.0434   NR TFH31038.1 2026735 g53093 i0 36.1 0.740890688259109 61 34 68 2 8 175 30 90 TFH31038.1 MAG: hypothetical protein E4G97_04840 [Deltaproteobacteria bacterium] diamond 183 40.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30428092 30428092 PRJNA608894_P_NODE_30453_length_332_cov_1.579151_g29954_i0 PRJNA608894 30453 332 1.579151 5.24278132 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 52.8 2.02e-5   NR MBM4283472.1 2026735 g29954 i0 31.1 2.29518072289157 106 63 95.8 3 320 3 66 161 MBM4283472.1 DUF1295 domain-containing protein [Deltaproteobacteria bacterium] diamond 762 52.8 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium
30775367 30775367 PRJNA608894_P_NODE_39574_length_285_cov_1.146226_g39075_i0 PRJNA608894 39574 285 1.146226 3.2667441 Polyangia bacterium 3058050 Bacteria Bacteria 43.9 0.00888   NR HEY8924287.1 3058050 g39075 i0 43.1 0.536842105263158 51 29 53.7 0 245 93 2 52 HEY8924287.1 hypothetical protein [Polyangia bacterium] diamond 153 43.9 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
30901676 30901676 PRJNA608894_P_NODE_37894_length_291_cov_1.605505_g37395_i0 PRJNA608894 37894 291 1.605505 4.67201955 Polyangia bacterium 3058050 Bacteria Bacteria 77 3.59e-14   NR HVR62546.1 3058050 g37395 i0 51 0.989690721649485 96 34 99 4 2 289 205 287 HVR62546.1 pirin family protein [Polyangia bacterium] diamond 288 77 1 Bacteria   Pseudomonadati Myxococcota         Polyangia bacterium
32483112 32483112 PRJNA608894_P_NODE_41939_length_276_cov_1.748768_g41440_i0 PRJNA608894 41939 276 1.748768 4.82659968 Deltaproteobacteria bacterium 2026735 Bacteria Bacteria 91.7 2.46e-20   NR MCB2187600.1 2026735 g41440 i0 56 2.44565217391304 75 33 81.5 0 275 51 165 239 MCB2187600.1 Bax inhibitor-1/YccA family protein [Deltaproteobacteria bacterium] diamond 675 91.7 1 Bacteria   Pseudomonadati Myxococcota Myxococcia       Deltaproteobacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;