contig_metadata
8 rows where bioproject = "PRJNA608894" and tax_phylum = "Bdellovibrionota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1861366 | 1861366 | PRJNA608894_P_NODE_36562_length_297_cov_5.736607_g36063_i0 | PRJNA608894 | 36562 | 297 | 5.736607 | 17.03772279 | Pseudobdellovibrionaceae bacterium | 2026715 | Bacteria | Bacteria | 470 | 6.43e-128 | NTclustered | gi|2258818259|gb|CP060220.1| | 2026715 | g36063 | i0 | 95.27 | 177.962962962963 | 296 | 14 | 99 | 0 | 1 | 296 | 3252537 | 3252242 | MAG: Pseudobdellovibrionaceae bacterium isolate HK-STAS-BDEL-7 chromosome | blastn | 52855 | 470 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrionaceae bacterium | |||
| 4975268 | 4975268 | PRJNA608894_P_NODE_52064_length_249_cov_0.875000_g51565_i0 | PRJNA608894 | 52064 | 249 | 0.875 | 2.17875 | Bacteriovorax | 146784 | Bacteria | Bacteria | 455 | 1.47e-123 | NTclustered | gi|1700689994|gb|CP030035.1| | 960 | g51565 | i0 | 99.598 | 238.666666666667 | 249 | 1 | 100 | 0 | 1 | 249 | 1661684 | 1661436 | Bacteriovorax stolpii strain AC01 chromosome, complete genome | blastn | 59428 | 455 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Bacteriovorax | Bacteriovorax stolpii | ||
| 11350497 | 11350497 | PRJNA608894_P_NODE_26369_length_367_cov_3.448980_g25872_i0 | PRJNA608894 | 26369 | 367 | 3.44898 | 12.6577566 | Bdellovibrio | 958 | Bacteria | Bacteria | 246 | 1.49e-60 | NTclustered | gi|578016248|gb|CP002190.1| | 765869 | g25872 | i0 | 86.878 | 116.942779291553 | 221 | 27 | 60 | 2 | 84 | 304 | 611717 | 611499 | Bdellovibrio bacteriovorus W, complete genome | blastn | 42918 | 248 | 0.991935483870968 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Bdellovibrio | Bdellovibrio bacteriovorus | ||
| 25373332 | 25373332 | PRJNA608894_P_NODE_15600_length_554_cov_2.835759_g15108_i0 | PRJNA608894 | 15600 | 554 | 2.835759 | 15.71010486 | Pseudobdellovibrionaceae | 213483 | Bacteria | Bacteria | 706 | 0 | NTclustered | gi|507148233|ref|NR_103040.1| | 453816 | g15108 | i0 | 89.73 | 167.518050541516 | 555 | 53 | 99 | 4 | 3 | 554 | 621 | 1174 | Bdellovibrio exovorus strain JSS 23S ribosomal RNA gene, complete sequence | blastn | 92805 | 713 | 0.990182328190743 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionia | Bdellovibrionales | Pseudobdellovibrionaceae | Pseudobdellovibrio | Pseudobdellovibrio exovorus | ||
| 28564465 | 28564465 | PRJNA608894_P_NODE_22127_length_421_cov_1.370690_g21631_i0 | PRJNA608894 | 22127 | 421 | 1.37069 | 5.7706049 | Oligoflexus sp. | 1971216 | Bacteria | Bacteria | 80.9 | 4.67e-16 | NR | WP_324954760.1 | 1971216 | g21631 | i0 | 64.9 | 0.406175771971496 | 57 | 20 | 40.6 | 0 | 36 | 206 | 94 | 150 | WP_324954760.1 hypothetical protein [Oligoflexus sp.] | diamond | 171 | 80.9 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Oligoflexia | Oligoflexales | Oligoflexaceae | Oligoflexus | Oligoflexus sp. | ||
| 28659276 | 28659276 | PRJNA608894_P_NODE_55087_length_246_cov_0.890173_g54588_i0 | PRJNA608894 | 55087 | 246 | 0.890173 | 2.18982558 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 56.2 | 5.78e-7 | NR | MEC7274862.1 | 3034175 | g54588 | i0 | 37.5 | 1.76829268292683 | 72 | 44 | 86.6 | 1 | 12 | 224 | 222 | 293 | MEC7274862.1 class I SAM-dependent methyltransferase [Bdellovibrionota bacterium] | diamond | 435 | 56.2 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium | ||||||
| 29922298 | 29922298 | PRJNA608894_P_NODE_51891_length_249_cov_0.875000_g51392_i0 | PRJNA608894 | 51891 | 249 | 0.875 | 2.17875 | Peredibacter starrii | 28202 | Bacteria | Bacteria | 143 | 1.0399999999999998e-37 | NR | WP_321399788.1 | 28202 | g51392 | i0 | 92.8 | 1 | 83 | 6 | 100 | 0 | 249 | 1 | 258 | 340 | WP_321399788.1 ABC-F family ATP-binding cassette domain-containing protein [Peredibacter starrii] | diamond | 249 | 143 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bacteriovoracia | Bacteriovoracales | Bacteriovoracaceae | Peredibacter | Peredibacter starrii | ||
| 32861190 | 32861190 | PRJNA608894_P_NODE_27780_length_354_cov_2.366548_g27281_i0 | PRJNA608894 | 27780 | 354 | 2.366548 | 8.37757992 | Bdellovibrionota bacterium | 3034175 | Bacteria | Bacteria | 72.8 | 8.75e-13 | NR | MEE3080293.1 | 3034175 | g27281 | i0 | 43.4 | 0.703389830508475 | 83 | 41 | 69.5 | 2 | 352 | 107 | 147 | 224 | MEE3080293.1 peroxiredoxin-like family protein [Bdellovibrionota bacterium] | diamond | 249 | 72.8 | 1 | Bacteria | Pseudomonadati | Bdellovibrionota | Bdellovibrionota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;