RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

34 rows where bioproject = "PRJNA608894" and tax_phylum = "Apicomplexa"

✎ View and edit SQL

This data as json, CSV (advanced)

analysis 2

tax_superkingdom 1

tax_phylum 1

  • Apicomplexa · 34 ✖

tax_clade 1

bioproject 1

  • PRJNA608894 · 34 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1147106 1147106 PRJNA608894_P_NODE_16561_length_527_cov_17.773128_g16066_i0 PRJNA608894 16561 527 17.773128 93.66438456 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 163 6.38e-48   NR XP_028869867.1 462227 g16066 i0 53.9 12.3017077798861 154 68 86 1 26 478 4 157 XP_028869867.1 Eukaryotic translation initiation factor 5A [Babesia sp. Xinjiang] diamond 6483 163 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
1861037 1861037 PRJNA608894_P_NODE_19762_length_461_cov_5.618557_g19266_i0 PRJNA608894 19762 461 5.618557 25.90154777 Toxoplasma gondii 5811 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.045   NTclustered gi|820698309|tpe|LN714497.1| 432359 g19266 i0 87.5 0.10412147505423 48 3 10 2 309 353 3209104 3209151 TPA_asm: Toxoplasma gondii VEG, chromosome chrVIIb, complete genome blastn 48 52.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
8238870 8238870 PRJNA608894_P_NODE_55567_length_245_cov_1.616279_g55068_i0 PRJNA608894 55567 245 1.616279 3.95988355 Babesia microti 5868 SAR_Eukaryotes SAR_Eukaryotes 78.7 3.65e-10   NTclustered gi|1206245954|ref|XR_002459985.1| 1133968 g55068 i0 94.118 0.416326530612245 51 3 21 0 171 221 1930 1980 Babesia microti strain RI 28S ribosomal RNA rRNA blastn 102 78.7 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia microti
9513882 9513882 PRJNA608894_P_NODE_38048_length_290_cov_2.124424_g37549_i0 PRJNA608894 38048 290 2.124424 6.1608296 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 113 1.17e-26   NR GFE54110.1 5869 g37549 i0 67.5 3.4551724137931 83 27 85.9 0 1 249 796 878 GFE54110.1 26S protease regulatory subunit 4 [Babesia ovis] diamond 1002 114 0.991228070175439 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
16449817 16449817 PRJNA608894_P_NODE_47373_length_258_cov_1.481081_g46874_i0 PRJNA608894 47373 258 1.481081 3.82118898 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 54.7 0.007   NTclustered gi|260232170|dbj|AK318169.1| 5811 g46874 i0 100 0.562015503875969 29 0 11 0 206 234 325 297 Toxoplasma gondii cDNA, clone: XTG09375.2, full cDNA, XTG Sugano cDNA library blastn 145 54.7 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Toxoplasma Toxoplasma gondii
19712082 19712082 PRJNA608894_P_NODE_40136_length_283_cov_1.138095_g39637_i0 PRJNA608894 40136 283 1.138095 3.22080885 Plasmodium falciparum 5833 SAR_Eukaryotes SAR_Eukaryotes 52.8 0.026   NTclustered gi|124808974|ref|XM_001348420.1| 36329 g39637 i0 88.636 0.15547703180212 44 4 16 1 39 82 5576 5534 Plasmodium falciparum 3D7 acid phosphatase, putative (PF3D7_1430300), partial mRNA blastn 44 52.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
23537927 23537927 PRJNA608894_P_NODE_37259_length_294_cov_1.723982_g36760_i0 PRJNA608894 37259 294 1.723982 5.06850708 Eucoccidiorida 75739 SAR_Eukaryotes SAR_Eukaryotes 160 2.4299999999999993e-43   NR XP_013440163.1 51315 g36760 i0 79.2 8.86734693877551 96 20 98 0 290 3 414 509 XP_013440163.1 hypothetical protein ENH_00028530 [Eimeria necatrix] diamond 2607 161 0.993788819875776 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
26827092 26827092 PRJNA608894_P_NODE_44261_length_268_cov_1.635897_g43762_i0 PRJNA608894 44261 268 1.635897 4.38420396 Babesia sp. Xinjiang 462227 SAR_Eukaryotes SAR_Eukaryotes 50.8 7.25e-5   NR XP_028871679.1 462227 g43762 i0 32 2.23880597014925 75 50 82.8 1 247 26 247 321 XP_028871679.1 50S ribosomal protein L3 [Babesia sp. Xinjiang] diamond 600 50.8 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia sp. Xinjiang
27016774 27016774 PRJNA608894_P_NODE_24982_length_382_cov_29.284790_g24485_i0 PRJNA608894 24982 382 29.28479 111.8678978 Neospora caninum Liverpool 572307 SAR_Eukaryotes SAR_Eukaryotes 133 2.32e-37   NR XP_003884403.1 572307 g24485 i0 58.1 3.26701570680628 105 44 82.5 0 19 333 11 115 XP_003884403.1 hypothetical protein NCLIV_048030 [Neospora caninum Liverpool] diamond 1248 133 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Neospora Neospora caninum
27016786 27016786 PRJNA608894_P_NODE_59062_length_242_cov_0.911243_g58563_i0 PRJNA608894 59062 242 0.911243 2.20520806 Plasmodium coatneyi 208452 SAR_Eukaryotes SAR_Eukaryotes 45.1 0.00556   NR XP_019916869.1 208452 g58563 i0 33.3 0.632231404958678 51 34 63.2 0 240 88 466 516 XP_019916869.1 Protein disulfide isomerase [Plasmodium coatneyi] diamond 153 45.1 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium coatneyi
27048548 27048548 PRJNA608894_P_NODE_14982_length_572_cov_1.472946_g14493_i0 PRJNA608894 14982 572 1.472946 8.42525112 Nephromyces sp. MMRI 2496275 SAR_Eukaryotes SAR_Eukaryotes 157 4.01e-41   NR AZL94760.1 2496275 g14493 i0 44.2 3.00524475524476 190 102 99.1 2 1 567 362 548 AZL94760.1 membrane-bound monodehydroascorbate reductase [Nephromyces sp. MMRI] diamond 1719 157 1 Eukaryota Sar   Apicomplexa Aconoidasida Nephromycida   Nephromyces Nephromyces sp. MMRI
27080116 27080116 PRJNA608894_P_NODE_50922_length_250_cov_0.870056_g50423_i0 PRJNA608894 50922 250 0.870056 2.17514 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 45.4 0.0046   NR XP_029217322.1 94643 g50423 i0 34.2 0.912 76 48 88.8 1 229 8 462 537 XP_029217322.1 DnaJ family Sec63 protein [Besnoitia besnoiti] diamond 228 45.4 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
27459468 27459468 PRJNA608894_P_NODE_25183_length_380_cov_2.296417_g24686_i0 PRJNA608894 25183 380 2.296417 8.7263846 Babesia bovis T2Bo 484906 SAR_Eukaryotes SAR_Eukaryotes 106 3.21e-25   NR XP_051623346.1 484906 g24686 i0 34.7 1.84736842105263 121 79 95.5 0 377 15 140 260 XP_051623346.1 putative integral membrane protein [Babesia bovis T2Bo] diamond 702 106 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bovis
28090755 28090755 PRJNA608894_P_NODE_58545_length_242_cov_1.822485_g58046_i0 PRJNA608894 58545 242 1.822485 4.4104137 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 45.8 3.25e-4   NR CAL7858805.1 1344799 g58046 i0 37.5 1.57438016528926 64 38 79.3 1 219 28 13 74 CAL7858805.1 unnamed protein product [Sarcocystis calchasi] diamond 381 45.8 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
28122378 28122378 PRJNA608894_P_NODE_48045_length_256_cov_1.486339_g47546_i0 PRJNA608894 48045 256 1.486339 3.80502784 Cystoisospora suis 483139 SAR_Eukaryotes SAR_Eukaryotes 119 3.35e-29   NR XP_067921068.1 483139 g47546 i0 69.6 6.4453125 79 24 92.6 0 255 19 142 220 XP_067921068.1 rna recognition motif-containing protein [Cystoisospora suis] diamond 1650 119 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Cystoisospora Cystoisospora suis
28564463 28564463 PRJNA608894_P_NODE_14207_length_597_cov_35.843511_g13724_i0 PRJNA608894 14207 597 35.843511 213.98576067 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 206 6.98e-64   NR OEH76901.1 88456 g13724 i0 60.7 3.58793969849246 183 72 92 0 592 44 29 211 OEH76901.1 ribosomal protein rpl19 [Cyclospora cayetanensis] diamond 2142 206 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
28830032 28830032 PRJNA608894_P_NODE_46488_length_261_cov_1.228723_g45989_i0 PRJNA608894 46488 261 1.228723 3.20696703 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 65.9 3.3e-10   NR XP_012768686.1 5866 g45989 i0 38.8 3.82758620689655 80 48 90.8 1 23 259 574 653 XP_012768686.1 fatty acyl-CoA synthetase family protein, putative [Babesia bigemina] diamond 999 65.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia bigemina
28956690 28956690 PRJNA608894_P_NODE_59148_length_242_cov_0.911243_g58649_i0 PRJNA608894 59148 242 0.911243 2.20520806 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 66.6 1.42e-10   NR XP_029218743.1 94643 g58649 i0 50.8 2.19421487603306 59 21 63.2 1 241 89 616 674 XP_029218743.1 putative kelch repeat protein [Besnoitia besnoiti] diamond 531 67 0.994029850746269 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
29146263 29146263 PRJNA608894_P_NODE_49289_length_252_cov_2.094972_g48790_i0 PRJNA608894 49289 252 2.094972 5.27932944 Sarcocystidae 5809 SAR_Eukaryotes SAR_Eukaryotes 48.1 4.37e-5   NR XP_029222352.1 94643 g48790 i0 41 3.55952380952381 61 35 72.6 1 51 233 14 73 XP_029222352.1 hypothetical protein BESB_006840 [Besnoitia besnoiti] diamond 897 48.1 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
29543116 29543116 PRJNA608894_P_NODE_38230_length_290_cov_1.064516_g37731_i0 PRJNA608894 38230 290 1.064516 3.0870964 Babesia duncani 323732 SAR_Eukaryotes SAR_Eukaryotes 63.9 2.3e-9   NR XP_067801500.1 323732 g37731 i0 37.2 2.78275862068966 86 51 85.9 2 250 2 406 491 XP_067801500.1 bifunctional Sortilin [Babesia duncani] diamond 807 63.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia duncani
29935442 29935442 PRJNA608894_P_NODE_26631_length_365_cov_1.318493_g26133_i0 PRJNA608894 26631 365 1.318493 4.81249945 Apicomplexa 5794 SAR_Eukaryotes SAR_Eukaryotes 57.4 7.75e-7   NR GFE52745.1 5869 g26133 i0 28 3.55068493150685 118 76 89.6 3 39 365 76 193 GFE52745.1 hypothetical protein BaOVIS_001490 [Babesia ovis] diamond 1296 57.4 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Babesiidae Babesia Babesia ovis
30156187 30156187 PRJNA608894_P_NODE_32832_length_316_cov_1.267490_g32333_i0 PRJNA608894 32832 316 1.26749 4.0052684 root 1 Root_unresolved Root_unresolved 110 4.31e-26   NR XP_013230962.1 5802 g32333 i0 57.8 14.5537974683544 102 43 96.8 0 9 314 80 181 XP_013230962.1 succinyl-CoA ligase, putative, partial [Eimeria tenella] diamond 4599 111 0.990990990990991 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
30566891 30566891 PRJNA608894_P_NODE_60633_length_240_cov_2.413174_g60134_i0 PRJNA608894 60633 240 2.413174 5.7916176 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 82 6.91e-17   NR EWC86079.1 5843 g60134 i0 45.6 6.9125 79 43 98.8 0 1 237 116 194 EWC86079.1 actin-2 [Plasmodium falciparum NF54] diamond 1659 82 1 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
30996434 30996434 PRJNA608894_P_NODE_35314_length_304_cov_1.212121_g34815_i0 PRJNA608894 35314 304 1.212121 3.68484784 Sarcocystis calchasi 1344799 SAR_Eukaryotes SAR_Eukaryotes 73.6 1.12e-12   NR CAL7864337.1 1344799 g34815 i0 40.4 1.91447368421053 94 54 92.8 1 286 5 388 479 CAL7864337.1 unnamed protein product [Sarcocystis calchasi] diamond 582 73.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Sarcocystis Sarcocystis calchasi
31122393 31122393 PRJNA608894_P_NODE_42275_length_275_cov_1.524752_g41776_i0 PRJNA608894 42275 275 1.524752 4.193068 Eimeria necatrix 51315 SAR_Eukaryotes SAR_Eukaryotes 112 2.34e-26   NR XP_013436920.1 51315 g41776 i0 65.6 1.96363636363636 90 31 98.2 0 1 270 422 511 XP_013436920.1 DNA-directed RNA polymerase, related, partial [Eimeria necatrix] diamond 540 112 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria necatrix
31167198 31167198 PRJNA608894_P_NODE_58375_length_243_cov_0.888235_g57876_i0 PRJNA608894 58375 243 0.888235 2.15841105 Plasmodium 5820 SAR_Eukaryotes SAR_Eukaryotes 100 1.78e-22   NR ETW63507.1 5835 g57876 i0 65.3 12.4814814814815 72 25 88.9 0 242 27 1991 2062 ETW63507.1 DNA-directed RNA polymerase II subunit RPB1 [Plasmodium falciparum CAMP/Malaysia] diamond 3033 101 0.99009900990099 Eukaryota Sar   Apicomplexa Aconoidasida Haemosporida Plasmodiidae Plasmodium Plasmodium falciparum
31723568 31723568 PRJNA608894_P_NODE_40957_length_280_cov_1.207729_g40458_i0 PRJNA608894 40957 280 1.207729 3.3816412 Cryptosporidium meleagridis 93969 SAR_Eukaryotes SAR_Eukaryotes 79 5.32e-17   NR KAK9171662.1 93969 g40458 i0 50 1.58571428571429 74 36 79.3 1 6 227 7 79 KAK9171662.1 Small nuclear ribonucleoprotein G [Cryptosporidium meleagridis] diamond 444 79 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium meleagridis
31736628 31736628 PRJNA608894_P_NODE_16597_length_527_cov_1.665198_g16102_i0 PRJNA608894 16597 527 1.665198 8.77559346 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 168 1.23e-48   NR XP_953458.1 5874 g16102 i0 46.5 7.28083491461101 159 85 90.5 0 525 49 65 223 XP_953458.1 proteasome subunit, putative [Theileria annulata] diamond 3837 168 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
31786702 31786702 PRJNA608894_P_NODE_55037_length_246_cov_0.890173_g54538_i0 PRJNA608894 55037 246 0.890173 2.18982558 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 58.2 1.37e-7   NR XP_029216934.1 94643 g54538 i0 42.5 5.20731707317073 73 34 89 1 246 28 297 361 XP_029216934.1 putative quinone oxidoreductase [Besnoitia besnoiti] diamond 1281 58.2 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
32008411 32008411 PRJNA608894_P_NODE_50338_length_251_cov_0.865169_g49839_i0 PRJNA608894 50338 251 0.865169 2.17157419 Cryptosporidium bovis 310047 SAR_Eukaryotes SAR_Eukaryotes 122 8.499999999999998e-32   NR XP_067181896.1 310047 g49839 i0 67.5 12.8964143426295 83 27 99.2 0 249 1 115 197 XP_067181896.1 HUSSY like methyltransferase [Cryptosporidium bovis] diamond 3237 122 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Cryptosporidiidae Cryptosporidium Cryptosporidium bovis
32356683 32356683 PRJNA608894_P_NODE_39639_length_284_cov_10.099526_g39140_i0 PRJNA608894 39639 284 10.099526 28.68265384 Besnoitia besnoiti 94643 SAR_Eukaryotes SAR_Eukaryotes 87 2.5e-19   NR XP_029215471.1 94643 g39140 i0 52.4 1.7112676056338 82 39 86.6 0 6 251 61 142 XP_029215471.1 acyl-coa-binding protein [Besnoitia besnoiti] diamond 486 87 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Sarcocystidae Besnoitia Besnoitia besnoiti
32369761 32369761 PRJNA608894_P_NODE_48479_length_255_cov_1.148352_g47980_i0 PRJNA608894 48479 255 1.148352 2.9282976 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 58.9 7.56e-8   NR XP_953636.1 5874 g47980 i0 47.2 5.88235294117647 72 37 83.5 1 13 225 3 74 XP_953636.1 ubiquitin-related chaperonin, putative [Theileria annulata] diamond 1500 58.9 1 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata
32433047 32433047 PRJNA608894_P_NODE_37879_length_291_cov_1.756881_g37380_i0 PRJNA608894 37879 291 1.756881 5.11252371 Eimeria 5800 SAR_Eukaryotes SAR_Eukaryotes 98.6 1.25e-21   NR AET50588.1 5802 g37380 i0 50.5 3.88659793814433 95 46 97.9 1 6 290 41 134 AET50588.1 hypothetical protein [Eimeria tenella] diamond 1131 98.6 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria tenella
32653596 32653596 PRJNA608894_P_NODE_21380_length_432_cov_2.554318_g20884_i0 PRJNA608894 21380 432 2.554318 11.03465376 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 132 1.71e-32   NR XP_954302.1 5874 g20884 i0 48.9 3.82638888888889 137 69 94.4 1 430 23 480 616 XP_954302.1 glycyl-tRNA synthetase [Theileria annulata] diamond 1653 133 0.992481203007519 Eukaryota Sar   Apicomplexa Aconoidasida Piroplasmida Theileriidae Theileria Theileria annulata

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;