contig_metadata
15 rows where bioproject = "PRJNA608894", tax_phylum = "Acidobacteriota" and tax_superkingdom = "Bacteria"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3136128 | 3136128 | PRJNA608894_P_NODE_26263_length_368_cov_2.722034_g25766_i0 | PRJNA608894 | 26263 | 368 | 2.722034 | 10.01708512 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 120 | 2.22e-32 | NR | MDQ7008654.1 | 1978231 | g25766 | i0 | 80.5 | 0.668478260869565 | 82 | 15 | 66.8 | 1 | 7 | 252 | 31 | 111 | MDQ7008654.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 246 | 120 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 10789607 | 10789607 | PRJNA608894_P_NODE_33029_length_314_cov_2.684647_g32530_i0 | PRJNA608894 | 33029 | 314 | 2.684647 | 8.42979158 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 342 | 1.5599999999999997e-89 | NTclustered | gi|1958093598|gb|CP065003.1| | 1978231 | g32530 | i0 | 87.584 | 83.9713375796178 | 298 | 34 | 94 | 3 | 19 | 314 | 317557 | 317261 | Acidobacteria bacterium isolate Kalu_18-Q3-R12-55_MAXAC.185_cln chromosome, complete genome | blastn | 26367 | 342 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 15888332 | 15888332 | PRJNA608894_P_NODE_35473_length_303_cov_1.626087_g34974_i0 | PRJNA608894 | 35473 | 303 | 1.626087 | 4.92704361 | Vicinamibacterales bacterium | 2910147 | Bacteria | Bacteria | 206 | 2.05e-48 | NTclustered | gi|2621701418|emb|OY760136.1| | 2910147 | g34974 | i0 | 80.97 | 178.376237623762 | 268 | 43 | 87 | 8 | 39 | 303 | 1699525 | 1699263 | MAG: Vicinamibacterales bacterium isolate f9e760c9-8bbe-4e76-9a0a-40d6f1fb97b8 genome assembly, chromosome: 1 | blastn | 54048 | 206 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Vicinamibacteria | Vicinamibacterales | Vicinamibacterales bacterium | ||||
| 26668356 | 26668356 | PRJNA608894_P_NODE_55801_length_245_cov_0.895349_g55302_i0 | PRJNA608894 | 55801 | 245 | 0.895349 | 2.19360505 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 70.5 | 1.71e-13 | NR | MDQ7008653.1 | 1978231 | g55302 | i0 | 77.1 | 0.587755102040816 | 48 | 11 | 58.8 | 0 | 144 | 1 | 16 | 63 | MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] | diamond | 144 | 70.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27301462 | 27301462 | PRJNA608894_P_NODE_60703_length_239_cov_2.728916_g60204_i0 | PRJNA608894 | 60703 | 239 | 2.728916 | 6.52210924 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 60.8 | 9.45e-10 | NR | MDQ7008653.1 | 1978231 | g60204 | i0 | 74.4 | 0.539748953974895 | 43 | 11 | 54 | 0 | 109 | 237 | 22 | 64 | MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] | diamond | 129 | 60.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27882898 | 27882898 | PRJNA608894_P_NODE_22305_length_418_cov_2.295652_g21809_i0 | PRJNA608894 | 22305 | 418 | 2.295652 | 9.59582536 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 98.2 | 1.23e-22 | NR | MBK8199413.1 | 1978231 | g21809 | i0 | 58.1 | 1.38516746411483 | 93 | 39 | 66.7 | 0 | 5 | 283 | 86 | 178 | MBK8199413.1 carboxymuconolactone decarboxylase family protein [Acidobacteriota bacterium] | diamond | 579 | 98.2 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 27901171 | 27901171 | PRJNA608894_P_NODE_53565_length_247_cov_1.672414_g53066_i0 | PRJNA608894 | 53565 | 247 | 1.672414 | 4.13086258 | Acidobacteriaceae bacterium | 2052142 | Bacteria | Bacteria | 52.8 | 1.03e-5 | NR | MDR1989006.1 | 2052142 | g53066 | i0 | 39.7 | 0.88663967611336 | 73 | 42 | 86.2 | 1 | 215 | 3 | 2 | 74 | MDR1989006.1 electron transfer flavoprotein subunit alpha/FixB family protein [Acidobacteriaceae bacterium] | diamond | 219 | 52.8 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacteriaceae bacterium | |||
| 28135659 | 28135659 | PRJNA608894_P_NODE_8985_length_867_cov_4.017632_g8558_i0 | PRJNA608894 | 8985 | 867 | 4.017632 | 34.83286944 | PVC group | 1783257 | Bacteria | Bacteria | 324 | 6.13e-108 | NR | MDA1312794.1 | 1978231 | g8558 | i0 | 56.8 | 30.7750865051903 | 278 | 116 | 96.2 | 1 | 865 | 32 | 8 | 281 | MDA1312794.1 aldolase/citrate lyase family protein [Acidobacteriota bacterium] | diamond | 26682 | 325 | 0.996923076923077 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 29777283 | 29777283 | PRJNA608894_P_NODE_54031_length_247_cov_0.885057_g53532_i0 | PRJNA608894 | 54031 | 247 | 0.885057 | 2.18609079 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 54.3 | 2.99e-6 | NR | WP_396127306.1 | 1615681 | g53532 | i0 | 43.3 | 4.7246963562753 | 60 | 34 | 72.9 | 0 | 48 | 227 | 82 | 141 | WP_396127306.1 glycosyltransferase family 2 protein [Acidicapsa acidisoli] | diamond | 1167 | 54.7 | 0.992687385740402 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidicapsa | Acidicapsa acidisoli | ||
| 29953789 | 29953789 | PRJNA608894_P_NODE_54211_length_247_cov_0.885057_g53712_i0 | PRJNA608894 | 54211 | 247 | 0.885057 | 2.18609079 | Pyrinomonadaceae bacterium | 2283092 | Bacteria | Bacteria | 85.5 | 2.64e-17 | NR | MCW5959990.1 | 2283092 | g53712 | i0 | 59.8 | 0.995951417004049 | 82 | 32 | 99.6 | 1 | 2 | 247 | 280 | 360 | MCW5959990.1 hypothetical protein [Pyrinomonadaceae bacterium] | diamond | 246 | 85.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Blastocatellia | Blastocatellales | Pyrinomonadaceae | Pyrinomonadaceae bacterium | |||
| 30806858 | 30806858 | PRJNA608894_P_NODE_60154_length_241_cov_0.916667_g59655_i0 | PRJNA608894 | 60154 | 241 | 0.916667 | 2.20916747 | Terriglobia bacterium | 2081523 | Bacteria | Bacteria | 107 | 6.76e-26 | NR | MBZ5617099.1 | 2081523 | g59655 | i0 | 63.8 | 0.995850622406639 | 80 | 29 | 99.6 | 0 | 1 | 240 | 60 | 139 | MBZ5617099.1 IS110 family transposase [Terriglobia bacterium] | diamond | 240 | 107 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobia bacterium | |||||
| 31091182 | 31091182 | PRJNA608894_P_NODE_14215_length_597_cov_2.904580_g13732_i0 | PRJNA608894 | 14215 | 597 | 2.90458 | 17.3403426 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 59.3 | 1.41e-6 | NR | MBS1873370.1 | 1978231 | g13732 | i0 | 33.6 | 1.33668341708543 | 125 | 61 | 61.3 | 5 | 169 | 534 | 112 | 217 | MBS1873370.1 hypothetical protein [Acidobacteriota bacterium] | diamond | 798 | 59.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 31850090 | 31850090 | PRJNA608894_P_NODE_49297_length_252_cov_2.022346_g48798_i0 | PRJNA608894 | 49297 | 252 | 2.022346 | 5.09631192 | Acidobacteriaceae bacterium | 2052142 | Bacteria | Bacteria | 53.5 | 6.51e-6 | NR | MDR3737288.1 | 2052142 | g48798 | i0 | 42.4 | 0.702380952380952 | 59 | 34 | 70.2 | 0 | 1 | 177 | 209 | 267 | MDR3737288.1 hypothetical protein [Acidobacteriaceae bacterium] | diamond | 177 | 53.5 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Terriglobia | Terriglobales | Acidobacteriaceae | Acidobacteriaceae bacterium | |||
| 31976653 | 31976653 | PRJNA608894_P_NODE_36198_length_299_cov_1.765487_g35699_i0 | PRJNA608894 | 36198 | 299 | 1.765487 | 5.27880613 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 81.3 | 1.94e-17 | NR | MDQ7008653.1 | 1978231 | g35699 | i0 | 81.1 | 0.531772575250836 | 53 | 10 | 53.2 | 0 | 141 | 299 | 24 | 76 | MDQ7008653.1 NFYB/HAP3 family transcription factor subunit [Acidobacteriota bacterium] | diamond | 159 | 81.3 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium | ||||||
| 32103241 | 32103241 | PRJNA608894_P_NODE_55898_length_245_cov_0.895349_g55399_i0 | PRJNA608894 | 55898 | 245 | 0.895349 | 2.19360505 | Acidobacteriota bacterium | 1978231 | Bacteria | Bacteria | 142 | 2.32e-37 | NR | MBL8136695.1 | 1978231 | g55399 | i0 | 86.4 | 0.991836734693878 | 81 | 11 | 99.2 | 0 | 245 | 3 | 172 | 252 | MBL8136695.1 TonB-dependent siderophore receptor [Acidobacteriota bacterium] | diamond | 243 | 142 | 1 | Bacteria | Pseudomonadati | Acidobacteriota | Acidobacteriota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;