RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA608894", tax_kingdom = "Metazoa" and tax_phylum = "Bryozoa"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA608894 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13339192 13339192 PRJNA608894_P_NODE_18751_length_479_cov_6.761084_g18255_i0 PRJNA608894 18751 479 6.761084 32.38559236 Membranipora membranacea 95170 Bryozoa other_Eukaryota 451 3.94e-122   NTclustered gi|2320635325|gb|ON868447.1| 95170 g18255 i0 84.944 88.0814196242171 445 67 93 0 34 478 19 463 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 42191 451 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
18437481 18437481 PRJNA608894_P_NODE_35795_length_301_cov_2.421053_g35296_i0 PRJNA608894 35795 301 2.421053 7.28736953 Membranipora membranacea 95170 Bryozoa other_Eukaryota 313 1.16e-80   NTclustered gi|2320635325|gb|ON868447.1| 95170 g35296 i0 89.754 78.734219269103 244 25 81 0 58 301 18 261 Membranipora membranacea calmodulin-like protein 1 mRNA, complete cds blastn 23699 313 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Membraniporidae Membranipora Membranipora membranacea
29524888 29524888 PRJNA608894_P_NODE_42330_length_275_cov_1.297030_g41831_i0 PRJNA608894 42330 275 1.29703 3.5668325 root 1 Root_unresolved Root_unresolved 113 1.78e-27   NR KAF6022229.1 10212 g41831 i0 62.1 6.67636363636364 87 33 94.9 0 2 262 269 355 KAF6022229.1 FAH [Bugula neritina] diamond 1836 113 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Bugulidae Bugula Bugula neritina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;