RNAquarium Metadata Server
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contig_metadata

5 rows where bioproject = "PRJNA608894", tax_kingdom = "Fungi" and tax_phylum = "Cryptomycota"

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tax_superkingdom 1

tax_phylum 1

  • Cryptomycota · 5 ✖

tax_kingdom 1

  • Fungi · 5 ✖

tax_clade 1

bioproject 1

  • PRJNA608894 · 5 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8238961 8238961 PRJNA608894_P_NODE_60667_length_239_cov_29.578313_g60168_i0 PRJNA608894 60667 239 29.578313 70.69216807 Rozella allomycis CSF55 988480 Fungi Fungi 82 9.7e-17   NR EPZ34692.1 988480 g60168 i0 66.2 3.94142259414226 65 21 80.3 1 217 26 190 254 EPZ34692.1 Nucleic acid-binding domain-containing protein [Rozella allomycis CSF55] diamond 942 82 1 Eukaryota Opisthokonta Fungi Cryptomycota       Rozella Rozella allomycis
31122395 31122395 PRJNA608894_P_NODE_44615_length_267_cov_1.587629_g44116_i0 PRJNA608894 44615 267 1.587629 4.23896943 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 105 5.769999999999999e-24   NR PJF17898.1 1246581 g44116 i0 79.3 31.1797752808989 58 12 65.2 0 263 90 596 653 PJF17898.1 Ste20 [Paramicrosporidium saccamoebae] diamond 8325 105 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
31610331 31610331 PRJNA608894_P_NODE_56036_length_245_cov_0.895349_g55537_i0 PRJNA608894 56036 245 0.895349 2.19360505 Eukaryota 2759 Fungi Fungi 58.5 9.43e-8   NR PJF19312.1 1246581 g55537 i0 47.7 2.2530612244898 65 34 79.6 0 245 51 264 328 PJF19312.1 60S ribosomal protein L2 [Paramicrosporidium saccamoebae] diamond 552 58.5 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
31913436 31913436 PRJNA608894_P_NODE_50497_length_251_cov_0.865169_g49998_i0 PRJNA608894 50497 251 0.865169 2.17157419 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 49.3 4.08e-5   NR PJF18805.1 1246581 g49998 i0 66.7 0.430278884462151 36 12 43 0 250 143 62 97 PJF18805.1 40S ribosomal protein S24 [Paramicrosporidium saccamoebae] diamond 108 49.3 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae
32672191 32672191 PRJNA608894_P_NODE_49980_length_251_cov_0.865169_g49481_i0 PRJNA608894 49980 251 0.865169 2.17157419 Paramicrosporidium saccamoebae 1246581 Fungi Fungi 43.9 0.0152   NR PJF16520.1 1246581 g49481 i0 40.9 2.37848605577689 44 24 50.2 1 130 5 1 44 PJF16520.1 hypothetical protein PSACC_03714 [Paramicrosporidium saccamoebae] diamond 597 43.9 1 Eukaryota Opisthokonta Fungi Cryptomycota       Paramicrosporidium Paramicrosporidium saccamoebae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;