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contig_metadata

3 rows where bioproject = "PRJNA608894" and tax_clade = "unclassified ssRNA positive-strand viruses"

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tax_superkingdom 1

tax_clade 1

  • unclassified ssRNA positive-strand viruses · 3 ✖

bioproject 1

  • PRJNA608894 · 3 ✖

analysis 1

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1861286 1861286 PRJNA608894_P_NODE_32262_length_319_cov_2.682927_g31763_i0 PRJNA608894 32262 319 2.682927 8.55853713 Picalivirus C 1224517 Viruses Viruses 494 4.13e-135   NTclustered gi|403044766|gb|JQ898336.1| 1224517 g31763 i0 94.654 0.996865203761755 318 17 99 0 1 318 1776 2093 Picalivirus C isolate PicaV-C polyprotein gene, partial cds; and capsid gene, complete cds blastn 318 494 1 Viruses unclassified ssRNA positive-strand viruses             Picalivirus C
1861300 1861300 PRJNA608894_P_NODE_32942_length_315_cov_1.504132_g32443_i0 PRJNA608894 32942 315 1.504132 4.7380158 Picalivirus C 1224517 Viruses Viruses 549 8.579999999999997e-152   NTclustered gi|403044766|gb|JQ898336.1| 1224517 g32443 i0 98.095 1 315 6 100 0 1 315 2952 3266 Picalivirus C isolate PicaV-C polyprotein gene, partial cds; and capsid gene, complete cds blastn 315 549 1 Viruses unclassified ssRNA positive-strand viruses             Picalivirus C
22262903 22262903 PRJNA608894_P_NODE_53638_length_247_cov_1.373563_g53139_i0 PRJNA608894 53638 247 1.373563 3.39270061 Picalivirus C 1224517 Viruses Viruses 412 8.89e-111   NTclustered gi|403044766|gb|JQ898336.1| 1224517 g53139 i0 96.787 1.0080971659919 249 4 100 3 1 247 3501 3747 Picalivirus C isolate PicaV-C polyprotein gene, partial cds; and capsid gene, complete cds blastn 249 412 1 Viruses unclassified ssRNA positive-strand viruses             Picalivirus C

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;