RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA608894", tax_clade = "Sar" and tax_phylum = "Foraminifera"

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tax_superkingdom 1

tax_phylum 1

  • Foraminifera · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA608894 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6964035 6964035 PRJNA608894_P_NODE_52446_length_249_cov_0.875000_g51947_i0 PRJNA608894 52446 249 0.875 2.17875 Opalinata 42740 SAR_Eukaryotes SAR_Eukaryotes 130 5.32e-33   NR ETO10415.1 46433 g51947 i0 76.8 4.93975903614458 82 19 98.8 0 247 2 580 661 ETO10415.1 inorganic pyrophosphatase [Reticulomyxa filosa] diamond 1230 131 0.99236641221374 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa
12064813 12064813 PRJNA608894_P_NODE_35810_length_301_cov_2.026316_g35311_i0 PRJNA608894 35810 301 2.026316 6.09921116 Reticulomyxa filosa 46433 SAR_Eukaryotes SAR_Eukaryotes 129 3.97e-33   NR ETO09453.1 46433 g35311 i0 67 7.99335548172757 100 30 99.7 2 2 301 196 292 ETO09453.1 hypothetical protein RFI_27925 [Reticulomyxa filosa] diamond 2406 129 1 Eukaryota Sar   Foraminifera     Reticulomyxidae Reticulomyxa Reticulomyxa filosa

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;