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contig_metadata

9 rows where bioproject = "PRJNA608894", tax_clade = "PVC group" and tax_phylum = "Planctomycetota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Planctomycetota · 9 ✖

tax_kingdom 1

tax_clade 1

  • PVC group · 9 ✖

bioproject 1

  • PRJNA608894 · 9 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
585120 585120 PRJNA608894_P_NODE_22761_length_412_cov_0.787611_g22264_i0 PRJNA608894 22761 412 0.787611 3.24495732 Paludisphaera borealis 1387353 Bacteria Bacteria 654 0   NTclustered gi|1133581311|gb|CP019082.1| 1387353 g22264 i0 95.377 158.776699029126 411 19 99 0 2 412 121283 121693 Paludisphaera borealis strain PX4 chromosome, complete genome blastn 65416 654 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Isosphaerales Isosphaeraceae Paludisphaera Paludisphaera borealis
14613952 14613952 PRJNA608894_P_NODE_13852_length_609_cov_5.759328_g13373_i0 PRJNA608894 13852 609 5.759328 35.07430752 root 1 Root_unresolved Root_unresolved 219 5.08e-69   NR MCF7962295.1 117 g13373 i0 60.7 9.65024630541872 178 65 85.7 3 66 587 22 198 MCF7962295.1 peptidylprolyl isomerase [Pirellula sp.] diamond 5877 221 0.990950226244344 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Pirellulales Pirellulaceae Pirellula Pirellula sp.
28185295 28185295 PRJNA608894_P_NODE_23346_length_403_cov_6.924242_g22849_i0 PRJNA608894 23346 403 6.924242 27.90469526 Planctomycetota bacterium 2026780 Bacteria Bacteria 45.4 0.0236   NR MCH8042360.1 2026780 g22849 i0 40.5 0.550868486352357 74 39 52.1 2 66 275 875 947 MCH8042360.1 organic solvent tolerance protein OstA [Planctomycetota bacterium] diamond 222 45.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
28469859 28469859 PRJNA608894_P_NODE_27126_length_360_cov_1.609756_g26627_i0 PRJNA608894 27126 360 1.609756 5.7951216 Planctomycetota bacterium 2026780 Bacteria Bacteria 44.7 0.0286   NR MEM6473951.1 2026780 g26627 i0 29.1 0.658333333333333 79 54 65.8 1 24 260 640 716 MEM6473951.1 hypothetical protein [Planctomycetota bacterium] diamond 237 44.7 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30775371 30775371 PRJNA608894_P_NODE_59554_length_241_cov_2.047619_g59055_i0 PRJNA608894 59554 241 2.047619 4.93476179 Planctomycetota bacterium 2026780 Bacteria Bacteria 79.3 1.05e-16   NR MBM4055472.1 2026780 g59055 i0 51.3 2.83817427385892 80 37 99.6 2 1 240 36 113 MBM4055472.1 hemin receptor [Planctomycetota bacterium] diamond 684 79.3 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
31641758 31641758 PRJNA608894_P_NODE_61576_length_230_cov_2.726115_g61077_i0 PRJNA608894 61576 230 2.726115 6.2700645 root 1 Root_unresolved Root_unresolved 42 0.0477   NR MEM8873732.1 2026780 g61077 i0 35.4 1.09565217391304 48 31 62.6 0 51 194 42 89 MEM8873732.1 PH domain-containing protein [Planctomycetota bacterium] diamond 252 42.4 0.990566037735849 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32388018 32388018 PRJNA608894_P_NODE_38219_length_290_cov_1.119816_g37720_i0 PRJNA608894 38219 290 1.119816 3.2474664 Gemmataceae bacterium 2052164 Bacteria Bacteria 81.6 8.87e-17   NR MFO0803182.1 2052164 g37720 i0 86.4 0.951724137931034 44 6 45.5 0 1 132 151 194 MFO0803182.1 hypothetical protein [Gemmataceae bacterium] diamond 276 81.6 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
32546468 32546468 PRJNA608894_P_NODE_33079_length_314_cov_1.701245_g32580_i0 PRJNA608894 33079 314 1.701245 5.3419093 Planctomycetota bacterium 2026780 Bacteria Bacteria 138 2.44e-37   NR MBA4683692.1 2026780 g32580 i0 64.1 1.96815286624204 103 37 98.4 0 2 310 207 309 MBA4683692.1 NAD(P)-dependent oxidoreductase [Planctomycetota bacterium] diamond 618 138 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
32703654 32703654 PRJNA608894_P_NODE_24320_length_390_cov_5.394322_g23823_i0 PRJNA608894 24320 390 5.394322 21.0378558 Phycisphaerae bacterium 2026778 Bacteria Bacteria 47.8 0.00153   NR MDX2200837.1 2026778 g23823 i0 41.4 0.446153846153846 58 34 44.6 0 338 165 117 174 MDX2200837.1 lipocalin family protein [Phycisphaerae bacterium] diamond 174 47.8 1 Bacteria PVC group Pseudomonadati Planctomycetota Phycisphaerae       Phycisphaerae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;