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contig_metadata

29 rows where bioproject = "PRJNA608894", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 29 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 29 ✖

bioproject 1

  • PRJNA608894 · 29 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1147121 1147121 PRJNA608894_P_NODE_23081_length_407_cov_1.889222_g22584_i0 PRJNA608894 23081 407 1.889222 7.68913354 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 199 8.640000000000001e-58   NR VDM41997.1 6265 g22584 i0 65.9 153.206388206388 138 44 99.5 2 405 1 455 592 VDM41997.1 unnamed protein product [Toxocara canis] diamond 62355 201 0.990049751243781 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Toxocaridae Toxocara Toxocara canis
1860952 1860952 PRJNA608894_P_NODE_15462_length_558_cov_1.783505_g14971_i0 PRJNA608894 15462 558 1.783505 9.9519579 Soboliphyme baturini 241478 Nematoda Nematoda 154 1.38e-44   NR VDP30855.1 241478 g14971 i0 86 4.5752688172043 86 12 46.2 0 5 262 39 124 VDP30855.1 unnamed protein product [Soboliphyme baturini] diamond 2553 154 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Dioctophymatida Soboliphymatidae Soboliphyme Soboliphyme baturini
4412727 4412727 PRJNA608894_P_NODE_21084_length_438_cov_1.534247_g20588_i0 PRJNA608894 21084 438 1.534247 6.72000186 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 212 1.99e-63   NR CDW54783.1 36087 g20588 i0 69.6 4.62328767123288 135 41 92.5 0 3 407 375 509 CDW54783.1 phenylalanyl tRNA synthetase alpha chain [Trichuris trichiura] diamond 2025 212 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris trichiura
20987487 20987487 PRJNA608894_P_NODE_20177_length_453_cov_2.978947_g19681_i0 PRJNA608894 20177 453 2.978947 13.49462991 Caenorhabditis brenneri 135651 Nematoda Nematoda 114 3.22e-29   NR EGT34536.1 135651 g19681 i0 57.9 2.80794701986755 95 40 62.9 0 330 46 40 134 EGT34536.1 hypothetical protein CAEBREN_26317 [Caenorhabditis brenneri] diamond 1272 115 0.991304347826087 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
20987932 20987932 PRJNA608894_P_NODE_44197_length_268_cov_2.246154_g43698_i0 PRJNA608894 44197 268 2.246154 6.01969272 Koerneria sp. RS1982 358044 Nematoda Nematoda 148 3.0399999999999996e-31   NTclustered gi|150984422|gb|EF634853.1| 358044 g43698 i0 80.851 3.01492537313433 188 36 70 0 51 238 9 196 Koerneria sp. RS1982 small subunit ribosomal protein 1 (rps-1) mRNA, partial cds blastn 808 148 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Koerneria Koerneria sp. RS1982
24811871 24811871 PRJNA608894_P_NODE_44600_length_267_cov_1.587629_g44101_i0 PRJNA608894 44600 267 1.587629 4.23896943 Ditylenchus destructor 166010 Nematoda Nematoda 106 1.85e-18   NTclustered gi|321173528|gb|HQ123250.1| 166010 g44101 i0 93.056 8.19475655430712 72 5 27 0 186 257 781 710 Ditylenchus destructor 14-3-3 (14-3-3a) mRNA, complete cds blastn 2188 106 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
24812036 24812036 PRJNA608894_P_NODE_52760_length_248_cov_1.320000_g52261_i0 PRJNA608894 52760 248 1.32 3.2736 Caenorhabditis briggsae 6238 Nematoda Nematoda 97.1 1.02e-15   NTclustered gi|268579136|ref|XM_002644505.1| 6238 g52261 i0 82.906 23.0322580645161 117 10 45 7 42 153 56 167 Caenorhabditis briggsae Protein CBR-PDI-2 (Cbr-pdi-2), partial mRNA blastn 5712 97.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
26618424 26618424 PRJNA608894_P_NODE_55521_length_245_cov_1.767442_g55022_i0 PRJNA608894 55521 245 1.767442 4.3302329 Rhabditida 6236 Nematoda Nematoda 65.9 2.18e-10   NR NP_001255925.1 6239 g55022 i0 56.3 6.26938775510204 64 26 75.9 1 244 59 48 111 NP_001255925.1 Peptidyl-prolyl cis-trans isomerase E [Caenorhabditis elegans] diamond 1536 65.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis elegans
27364905 27364905 PRJNA608894_P_NODE_62483_length_196_cov_5.886179_g61984_i0 PRJNA608894 62483 196 5.886179 11.536910839999999 Parelaphostrongylus tenuis 148309 Nematoda Nematoda 47.8 7.35e-5   NR KAJ1375091.1 148309 g61984 i0 54.1 0.566326530612245 37 17 56.6 0 67 177 59 95 KAJ1375091.1 hypothetical protein KIN20_038335 [Parelaphostrongylus tenuis] diamond 111 47.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Parelaphostrongylus Parelaphostrongylus tenuis
27648887 27648887 PRJNA608894_P_NODE_22464_length_415_cov_18.824561_g21968_i0 PRJNA608894 22464 415 18.824561 78.12192815 Aphelenchoides avenae 70226 Nematoda Nematoda 54.3 5.67e-6   NR KAH7728422.1 70226 g21968 i0 39.2 0.534939759036145 74 37 52 2 394 179 96 163 KAH7728422.1 Vitellogenin-linked Transcript family member [Aphelenchoides avenae] diamond 222 54.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
27964453 27964453 PRJNA608894_P_NODE_21105_length_437_cov_3.601648_g20609_i0 PRJNA608894 21105 437 3.601648 15.73920176 Meloidogyne graminicola 189291 Nematoda Nematoda 49.3 0.00131   NR KAF7638189.1 189291 g20609 i0 43.8 0.768878718535469 48 24 33 1 167 24 185 229 KAF7638189.1 hypothetical protein Mgra_00002417 [Meloidogyne graminicola] diamond 336 49.3 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
27964462 27964462 PRJNA608894_P_NODE_53065_length_248_cov_0.880000_g52566_i0 PRJNA608894 53065 248 0.88 2.1824 Auanema sp. JU1783 2878363 Nematoda Nematoda 97.8 2.2700000000000003e-22   NR CAI4222337.1 2878363 g52566 i0 56.1 0.991935483870968 82 36 99.2 0 246 1 129 210 CAI4222337.1 unnamed protein product [Auanema sp. JU1783] diamond 246 97.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
28090744 28090744 PRJNA608894_P_NODE_29885_length_336_cov_3.250951_g29386_i0 PRJNA608894 29885 336 3.250951 10.92319536 Diploscapter pachys 2018661 Nematoda Nematoda 80.9 7.3e-17   NR PAV69430.1 2018661 g29386 i0 40.2 0.866071428571429 97 58 86.6 0 39 329 11 107 PAV69430.1 hypothetical protein WR25_09036 [Diploscapter pachys] diamond 291 80.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Diploscapter Diploscapter pachys
28198488 28198488 PRJNA608894_P_NODE_34506_length_308_cov_1.744681_g34007_i0 PRJNA608894 34506 308 1.744681 5.37361748 Metazoa 33208 Nematoda Nematoda 104 1.37e-23   NR KAE9416894.1 6313 g34007 i0 75.4 27.7792207792208 65 16 63.3 0 108 302 311 375 KAE9416894.1 hypothetical protein Angca_009066 [Angiostrongylus cantonensis] diamond 8556 105 0.990476190476191 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
28293294 28293294 PRJNA608894_P_NODE_29146_length_342_cov_5.323420_g28647_i0 PRJNA608894 29146 342 5.32342 18.2060964 Metazoa 33208 Nematoda Nematoda 155 2.4099999999999998e-46   NR ULT99372.1 6238 g28647 i0 83.9 131.149122807018 87 14 76.3 0 325 65 40 126 ULT99372.1 hypothetical protein L3Y34_000603 [Caenorhabditis briggsae] diamond 44853 155 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis briggsae
29038295 29038295 PRJNA608894_P_NODE_11648_length_702_cov_1.898251_g11182_i0 PRJNA608894 11648 702 1.898251 13.32572202 Meloidogyne graminicola 189291 Nematoda Nematoda 119 1.2799999999999999e-28   NR AVZ46778.1 189291 g11182 i0 52.2 0.572649572649573 134 61 56.8 2 633 235 117 248 AVZ46778.1 hypothetical protein [Meloidogyne graminicola] diamond 402 119 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
29290574 29290574 PRJNA608894_P_NODE_49549_length_252_cov_1.089385_g49050_i0 PRJNA608894 49549 252 1.089385 2.7452502 Trichinella papuae 268474 Nematoda Nematoda 58.5 7.58e-8   NR KRZ74397.1 268474 g49050 i0 56.8 6.80952380952381 44 19 52.4 0 2 133 39 82 KRZ74397.1 hypothetical protein T10_10774 [Trichinella papuae] diamond 1716 58.5 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichinellidae Trichinella Trichinella papuae
29605991 29605991 PRJNA608894_P_NODE_17910_length_496_cov_31.664303_g17414_i0 PRJNA608894 17910 496 31.664303 157.05494288 Bursaphelenchus xylophilus 6326 Nematoda Nematoda 202 9.72e-64   NR CAD5208001.1 6326 g17414 i0 66.2 1.76008064516129 145 49 87.7 0 484 50 1 145 CAD5208001.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 873 202 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
30459694 30459694 PRJNA608894_P_NODE_20393_length_449_cov_13.742021_g19897_i0 PRJNA608894 20393 449 13.742021 61.70167429 Pristionchus fissidentatus 1538716 Nematoda Nematoda 87.8 4.38e-19   NR GMT18625.1 1538716 g19897 i0 41.2 0.875278396436526 131 71 86.9 3 5 394 1 126 GMT18625.1 hypothetical protein PFISCL1PPCAC_9922 [Pristionchus fissidentatus] diamond 393 87.8 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Neodiplogasteridae Pristionchus Pristionchus fissidentatus
30522413 30522413 PRJNA608894_P_NODE_57833_length_243_cov_0.905882_g57334_i0 PRJNA608894 57833 243 0.905882 2.20129326 Angiostrongylus costaricensis 334426 Nematoda Nematoda 55.5 2.84e-7   NR VDM60085.1 334426 g57334 i0 37.7 0.753086419753086 61 35 75.3 1 223 41 5 62 VDM60085.1 unnamed protein product [Angiostrongylus costaricensis] diamond 183 55.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus costaricensis
30648591 30648591 PRJNA608894_P_NODE_61513_length_231_cov_2.297468_g61014_i0 PRJNA608894 61513 231 2.297468 5.30715108 Aphelenchoides avenae 70226 Nematoda Nematoda 68.9 1.85e-11   NR KAH7714205.1 70226 g61014 i0 50.8 5.57142857142857 61 30 79.2 0 24 206 893 953 KAH7714205.1 PQQ enzyme repeat family protein [Aphelenchoides avenae] diamond 1287 68.9 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
30883087 30883087 PRJNA608894_P_NODE_38574_length_288_cov_2.074419_g38075_i0 PRJNA608894 38574 288 2.074419 5.97432672 root 1 Root_unresolved Root_unresolved 121 7.93e-33   NR CAD5208001.1 6326 g38075 i0 57.4 2.94791666666667 94 40 97.9 0 288 7 52 145 CAD5208001.1 unnamed protein product [Bursaphelenchus xylophilus] diamond 849 122 0.991803278688525 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Bursaphelenchus Bursaphelenchus xylophilus
30996442 30996442 PRJNA608894_P_NODE_54234_length_247_cov_0.885057_g53735_i0 PRJNA608894 54234 247 0.885057 2.18609079 Auanema sp. JU1783 2878363 Nematoda Nematoda 166 8.29e-49   NR CAI4232904.1 2878363 g53735 i0 92.7 15.2064777327935 82 6 99.6 0 246 1 149 230 CAI4232904.1 unnamed protein product [Auanema sp. JU1783] diamond 3756 166 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Auanema Auanema sp. JU1783
31312390 31312390 PRJNA608894_P_NODE_21055_length_438_cov_3.221918_g20559_i0 PRJNA608894 21055 438 3.221918 14.11200084 Cylicocyclus nassatus 53992 Nematoda Nematoda 153 1.4199999999999999e-42   NR CAJ0594797.1 53992 g20559 i0 46.9 4.11643835616438 143 75 97.3 1 428 3 174 316 CAJ0594797.1 unnamed protein product [Cylicocyclus nassatus] diamond 1803 153 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Strongylidae Cylicocyclus Cylicocyclus nassatus
31470770 31470770 PRJNA608894_P_NODE_44956_length_266_cov_1.383420_g44457_i0 PRJNA608894 44956 266 1.38342 3.6798972 Meloidogyne graminicola 189291 Nematoda Nematoda 43.5 0.0254   NR KAF7637911.1 189291 g44457 i0 29.2 0.81203007518797 72 51 81.2 0 31 246 52 123 KAF7637911.1 hypothetical protein Mgra_00002614 [Meloidogyne graminicola] diamond 216 43.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
31799857 31799857 PRJNA608894_P_NODE_19097_length_473_cov_2.287500_g18601_i0 PRJNA608894 19097 473 2.2875 10.819875 Metazoa 33208 Nematoda Nematoda 146 3.11e-41   NR VDM52218.1 334426 g18601 i0 47.7 16.0972515856237 151 65 86.9 3 473 63 43 193 VDM52218.1 unnamed protein product [Angiostrongylus costaricensis] diamond 7614 146 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus costaricensis
31913433 31913433 PRJNA608894_P_NODE_38537_length_288_cov_2.953488_g38038_i0 PRJNA608894 38537 288 2.953488 8.50604544 Trichuris suis 68888 Nematoda Nematoda 139 7.01e-37   NR KHJ40851.1 68888 g38038 i0 67.4 9.71875 86 28 89.6 0 1 258 393 478 KHJ40851.1 phenylalanine--tRNA ligase, alpha subunit [Trichuris suis] diamond 2799 139 1 Eukaryota Opisthokonta Metazoa Nematoda Enoplea Trichinellida Trichuridae Trichuris Trichuris suis
31958150 31958150 PRJNA608894_P_NODE_13137_length_637_cov_1.638298_g12660_i0 PRJNA608894 13137 637 1.638298 10.43595826 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 245 1.02e-75   NR KAI6190215.1 293665 g12660 i0 53.3 98.6750392464678 212 99 99.8 0 636 1 162 373 KAI6190215.1 MPN domain-containing protein [Aphelenchoides bicaudatus] diamond 62856 245 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides bicaudatus
32148143 32148143 PRJNA608894_P_NODE_28938_length_344_cov_2.501845_g28439_i0 PRJNA608894 28938 344 2.501845 8.6063468 Opisthokonta 33154 Nematoda Nematoda 60.5 7.43e-8   NR KAL3074288.1 97005 g28439 i0 37 6.60174418604651 81 51 70.6 0 4 246 612 692 KAL3074288.1 hypothetical protein niasHS_015118 [Heterodera schachtii] diamond 2271 60.5 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Heteroderidae Heterodera Heterodera schachtii

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;