contig_metadata
15 rows where bioproject = "PRJNA608660" and tax_phylum = "Nitrospirota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4412161 | 4412161 | PRJNA608660_P_NODE_15884_length_365_cov_2.541139_g15530_i0 | PRJNA608660 | 15884 | 365 | 2.541139 | 9.27515735 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 540 | 6.06e-149 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g15530 | i0 | 95.044 | 211.619178082192 | 343 | 17 | 94 | 0 | 10 | 352 | 1277252 | 1277594 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 77241 | 540 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 4412465 | 4412465 | PRJNA608660_P_NODE_48184_length_164_cov_8.956522_g47827_i0 | PRJNA608660 | 48184 | 164 | 8.956522 | 14.68869608 | Nitrospirota bacterium | 2026887 | Bacteria | Bacteria | 235 | 1.27e-57 | NTclustered | gi|2621702110|emb|OY760142.1| | 2026887 | g47827 | i0 | 95.862 | 357.493902439024 | 145 | 6 | 88 | 0 | 9 | 153 | 1460311 | 1460455 | MAG: Nitrospirota bacterium isolate 41fe4016-ed88-40a2-aca4-2b8d86c50af7 genome assembly, chromosome: 1 | blastn | 58629 | 235 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospirota bacterium | ||||||
| 7524693 | 7524693 | PRJNA608660_P_NODE_20086_length_314_cov_7.671698_g19730_i0 | PRJNA608660 | 20086 | 314 | 7.671698 | 24.08913172 | Nitrospira | 1234 | Bacteria | Bacteria | 503 | 6.75e-138 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g19730 | i0 | 96.104 | 270.127388535032 | 308 | 12 | 98 | 0 | 1 | 308 | 1278063 | 1278370 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 84820 | 508 | 0.990157480314961 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 8237587 | 8237587 | PRJNA608660_P_NODE_1007_length_1119_cov_15.976636_g872_i0 | PRJNA608660 | 1007 | 1119 | 15.976636 | 178.77855684 | Nitrospira moscoviensis | 42253 | Bacteria | Bacteria | 1725 | 0 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g872 | i0 | 94.995 | 441.078641644325 | 1099 | 55 | 98 | 0 | 10 | 1108 | 1278005 | 1279103 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 493567 | 1725 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 13900973 | 13900973 | PRJNA608660_P_NODE_50991_length_152_cov_8.961165_g50634_i0 | PRJNA608660 | 50991 | 152 | 8.961165 | 13.6209708 | Nitrospira | 1234 | Bacteria | Bacteria | 243 | 6.87e-60 | NTclustered | gi|922305621|gb|CP011801.1| | 42253 | g50634 | i0 | 97.857 | 104.092105263158 | 140 | 3 | 92 | 0 | 11 | 150 | 1279712 | 1279573 | Nitrospira moscoviensis strain NSP M-1, complete genome | blastn | 15822 | 243 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira moscoviensis | ||
| 15887570 | 15887570 | PRJNA608660_P_NODE_2693_length_822_cov_7.014230_g2467_i0 | PRJNA608660 | 2693 | 822 | 7.01423 | 57.6569706 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 325 | 8.189999999999999e-109 | NR | MBH0187608.1 | 70125 | g2467 | i0 | 97 | 1.82846715328467 | 167 | 5 | 60.9 | 0 | 18 | 518 | 83 | 249 | MBH0187608.1 aldehyde dehydrogenase family protein [Nitrospira sp.] | diamond | 1503 | 325 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 19711120 | 19711120 | PRJNA608660_P_NODE_14656_length_383_cov_2.023952_g14303_i0 | PRJNA608660 | 14656 | 383 | 2.023952 | 7.75173616 | Nitrospira | 1234 | Bacteria | Bacteria | 123 | 9.11e-30 | NR | WP_087473321.1 | 96242 | g14303 | i0 | 96.9 | 1.01827676240209 | 65 | 2 | 50.9 | 0 | 272 | 78 | 1 | 65 | WP_087473321.1 ATP-binding protein [Nitrospira cf. moscoviensis SBR1015] | diamond | 390 | 123 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira cf. moscoviensis SBR1015 | ||
| 21548851 | 21548851 | PRJNA608660_P_NODE_36897_length_200_cov_5.529801_g36541_i0 | PRJNA608660 | 36897 | 200 | 5.529801 | 11.059602 | Nitrospira | 1234 | Bacteria | Bacteria | 255 | 1.23e-63 | NTclustered | gi|2863125063|dbj|AP038805.1| | 70125 | g36541 | i0 | 98.611 | 130.175 | 144 | 2 | 100 | 0 | 57 | 200 | 2094146 | 2094289 | MAG: Nitrospira sp. AFB01 DNA, complete genome | blastn | 26035 | 255 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 21548884 | 21548884 | PRJNA608660_P_NODE_46377_length_168_cov_0.873950_g46020_i0 | PRJNA608660 | 46377 | 168 | 0.87395 | 1.468236 | Nitrospira lenta | 1436998 | Bacteria | Bacteria | 90.9 | 1.51e-20 | NR | WP_121990699.1 | 1436998 | g46020 | i0 | 100 | 0.785714285714286 | 44 | 0 | 78.6 | 0 | 35 | 166 | 56 | 99 | WP_121990699.1 30S ribosomal protein S2 [Nitrospira lenta] | diamond | 132 | 90.9 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira lenta | ||
| 28027743 | 28027743 | PRJNA608660_P_NODE_11425_length_440_cov_7.749361_g11078_i0 | PRJNA608660 | 11425 | 440 | 7.749361 | 34.0971884 | Nitrospira sp. ST-bin4 | 1978764 | Bacteria | Bacteria | 75.1 | 2.97e-13 | NR | OQW59010.1 | 1978764 | g11078 | i0 | 100 | 0.225 | 33 | 0 | 22.5 | 0 | 302 | 400 | 1 | 33 | OQW59010.1 MAG: hypothetical protein BVN28_10975 [Nitrospira sp. ST-bin4] | diamond | 99 | 75.1 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. ST-bin4 | ||
| 29177637 | 29177637 | PRJNA608660_P_NODE_48549_length_164_cov_0.904348_g48192_i0 | PRJNA608660 | 48549 | 164 | 0.904348 | 1.48313072 | Nitrospira | 1234 | Bacteria | Bacteria | 109 | 1.78e-27 | NR | MBH0184527.1 | 70125 | g48192 | i0 | 98.1 | 3.95121951219512 | 54 | 1 | 98.8 | 0 | 2 | 163 | 35 | 88 | MBH0184527.1 alanine--glyoxylate aminotransferase family protein [Nitrospira sp.] | diamond | 648 | 109 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 29543110 | 29543110 | PRJNA608660_P_NODE_46010_length_168_cov_1.697479_g45653_i0 | PRJNA608660 | 46010 | 168 | 1.697479 | 2.85176472 | Nitrospira cf. moscoviensis SBR1 | 96242 | Bacteria | Bacteria | 92.4 | 4.36e-20 | NR | WP_087474318.1 | 96242 | g45653 | i0 | 100 | 0.75 | 42 | 0 | 75 | 0 | 168 | 43 | 28 | 69 | WP_087474318.1 PEP/pyruvate-binding domain-containing protein [Nitrospira cf. moscoviensis SBR1015] | diamond | 126 | 92.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira cf. moscoviensis SBR1015 | ||
| 30238087 | 30238087 | PRJNA608660_P_NODE_15252_length_374_cov_1.812308_g14899_i0 | PRJNA608660 | 15252 | 374 | 1.812308 | 6.77803192 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 195 | 5.48e-58 | NR | HEY7130345.1 | 70125 | g14899 | i0 | 84.9 | 0.850267379679144 | 106 | 15 | 85 | 1 | 9 | 326 | 145 | 249 | HEY7130345.1 DUF4038 domain-containing protein [Nitrospira sp.] | diamond | 318 | 195 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 31818437 | 31818437 | PRJNA608660_P_NODE_39917_length_188_cov_3.546763_g39560_i0 | PRJNA608660 | 39917 | 188 | 3.546763 | 6.66791444 | Nitrospira sp. | 70125 | Bacteria | Bacteria | 92.4 | 8.910000000000001e-21 | NR | MEQ1627923.1 | 70125 | g39560 | i0 | 93.5 | 0.734042553191489 | 46 | 3 | 73.4 | 0 | 144 | 7 | 1 | 46 | MEQ1627923.1 DUF6502 family protein [Nitrospira sp.] | diamond | 138 | 92.4 | 1 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. | ||
| 32243338 | 32243338 | PRJNA608660_P_NODE_5938_length_602_cov_9.504521_g5627_i0 | PRJNA608660 | 5938 | 602 | 9.504521 | 57.21721642 | Nitrospira | 1234 | Bacteria | Bacteria | 216 | 8.169999999999999e-62 | NR | MBH0190253.1 | 70125 | g5627 | i0 | 99.1 | 1.08637873754153 | 109 | 1 | 54.3 | 0 | 265 | 591 | 567 | 675 | MBH0190253.1 hypothetical protein [Nitrospira sp.] | diamond | 654 | 217 | 0.995391705069124 | Bacteria | Pseudomonadati | Nitrospirota | Nitrospiria | Nitrospirales | Nitrospiraceae | Nitrospira | Nitrospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;