RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA608660" and tax_phylum = "Evosea"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Evosea · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA608660 · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19711368 19711368 PRJNA608660_P_NODE_42956_length_177_cov_2.031250_g42599_i0 PRJNA608660 42956 177 2.03125 3.5953125 Entamoeba histolytica 5759 Evosea other_Eukaryota 298 1.74e-76   NTclustered gi|415339|emb|X65163.1| 5759 g42599 i0 99.39 1.4180790960452 164 1 93 0 1 164 6160 6323 E.histolytica rRNA blastn 251 298 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba histolytica
22261716 22261716 PRJNA608660_P_NODE_23198_length_284_cov_16.025532_g22842_i0 PRJNA608660 23198 284 16.025532 45.51251088 Angulamoeba sp. FN806 1654985 Evosea other_Eukaryota 451 2.21e-122   NTclustered gi|821394117|gb|KP864086.1| 1654985 g22842 i0 97.037 43.6549295774648 270 4 95 2 1 270 1369 1634 Angulamoeba sp. FN806 small subunit ribosomal RNA gene, partial sequence blastn 12398 451 1 Eukaryota Amoebozoa   Evosea Variosea     Angulamoeba Angulamoeba sp. FN806
32040030 32040030 PRJNA608660_P_NODE_35338_length_207_cov_4.322785_g34982_i0 PRJNA608660 35338 207 4.322785 8.94816495 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 42 0.0423   NR PRP89545.1 1890364 g34982 i0 45.2 0.608695652173913 42 23 60.9 0 203 78 324 365 PRP89545.1 hypothetical protein PROFUN_00809 [Planoprotostelium fungivorum] diamond 126 42 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;