RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA608660" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA608660 · 8 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2422196 2422196 PRJNA608660_P_NODE_35902_length_205_cov_1.333333_g35546_i0 PRJNA608660 35902 205 1.333333 2.73333265 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 379 7.229999999999999e-101   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g35546 i0 100 9.69268292682927 205 0 100 0 1 205 1073 869 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 1987 379 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
6962878 6962878 PRJNA608660_P_NODE_19506_length_321_cov_2.113971_g19150_i0 PRJNA608660 19506 321 2.113971 6.78584691 uncultured Sphenoderia 1938481 SAR_Eukaryotes SAR_Eukaryotes 207 6.07e-49   NTclustered gi|1723854338|gb|MN323346.1| 1938481 g19150 i0 88.889 54.0218068535826 171 15 53 4 8 176 287 119 Uncultured Sphenoderia clone OTU1253 small subunit ribosomal RNA gene, partial sequence blastn 17341 207 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Sphenoderiidae   uncultured Sphenoderia
11350434 11350434 PRJNA608660_P_NODE_50509_length_157_cov_2.351852_g50152_i0 PRJNA608660 50509 157 2.351852 3.69240764 Glissomonadida 1238681 SAR_Eukaryotes SAR_Eukaryotes 279 5.46e-71   NTclustered gi|2030163897|gb|MZ044034.1| 1808984 g50152 i0 100 35.2292993630573 151 0 96 0 2 152 402 552 Rosculus terrestris isolate S14D1 small subunit ribosomal RNA gene, partial sequence blastn 5531 279 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus terrestris
12625993 12625993 PRJNA608660_P_NODE_47830_length_165_cov_1.344828_g47473_i0 PRJNA608660 47830 165 1.344828 2.2189662 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 267 4.53e-67   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g47473 i0 95.808 9.64848484848485 167 4 100 3 1 165 807 642 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 1592 267 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
13338669 13338669 PRJNA608660_P_NODE_16231_length_360_cov_3.900322_g15877_i0 PRJNA608660 16231 360 3.900322 14.0411592 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 248 4.05e-61   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g15877 i0 81.346 24.7666666666667 327 41 89 15 39 360 2867 2556 Rosculus vulgaris isolate CCA sequence blastn 8916 248 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
13900889 13900889 PRJNA608660_P_NODE_30631_length_232_cov_1.174863_g30275_i0 PRJNA608660 30631 232 1.174863 2.72568216 Cryomonadida 589444 SAR_Eukaryotes SAR_Eukaryotes 257 4.1e-64   NTclustered gi|1185383841|gb|KY977288.1| 1979837 g30275 i0 95.152 60.3793103448276 165 5 71 3 69 232 90 252 Protaspa sp. isolate Otu002897 small subunit ribosomal RNA gene, partial sequence blastn 14008 259 0.992277992277992 Eukaryota Sar   Cercozoa Thecofilosea Cryomonadida Protaspidae Protaspa Protaspa sp.
20987244 20987244 PRJNA608660_P_NODE_5817_length_608_cov_4.486583_g5508_i0 PRJNA608660 5817 608 4.486583 27.27842464 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 955 0   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g5508 i0 95.515 15.1595394736842 602 19 98 8 13 608 1273 674 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 9217 955 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
22261796 22261796 PRJNA608660_P_NODE_29998_length_236_cov_0.973262_g29642_i0 PRJNA608660 29998 236 0.973262 2.29689832 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 394 3.05e-105   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g29642 i0 97.403 2.97033898305085 231 6 98 0 1 231 162 392 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 701 394 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;