RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA608660" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Thermoproteati · 2 ✖

bioproject 1

  • PRJNA608660 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28943620 28943620 PRJNA608660_P_NODE_5288_length_634_cov_3.644444_g4987_i0 PRJNA608660 5288 634 3.644444 23.10577496 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 197 1.06e-60   NR HET7642787.1 2169593 g4987 i0 95.2 0.496845425867508 105 5 49.7 0 315 1 18 122 HET7642787.1 cupredoxin domain-containing protein [Nitrososphaeraceae archaeon] diamond 315 197 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
31565708 31565708 PRJNA608660_P_NODE_37116_length_200_cov_1.026490_g36760_i0 PRJNA608660 37116 200 1.02649 2.05298 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 101 3.789999999999999e-23   NR HJT83590.1 2169593 g36760 i0 92.2 0.765 51 4 76.5 0 1 153 310 360 HJT83590.1 thioredoxin domain-containing protein [Nitrososphaeraceae archaeon] diamond 153 101 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;