contig_metadata
12 rows where bioproject = "PRJNA608660", tax_kingdom = "Pseudomonadati" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5688276 | 5688276 | PRJNA608660_P_NODE_1785_length_937_cov_7.718468_g974_i1 | PRJNA608660 | 1785 | 937 | 7.718468 | 72.32204516 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 612 | 3.47e-170 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g974 | i1 | 78.942 | 121.385272145144 | 945 | 165 | 99 | 20 | 1 | 926 | 1312523 | 1313452 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 113738 | 612 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 6250649 | 6250649 | PRJNA608660_P_NODE_41625_length_182_cov_1.563910_g41268_i0 | PRJNA608660 | 41625 | 182 | 1.56391 | 2.8463162 | Pendulispora | 3375062 | Bacteria | Bacteria | 178 | 2.45e-40 | NTclustered | gi|2698045512|gb|CP089929.1| | 2741070 | g41268 | i0 | 94.737 | 151.989010989011 | 114 | 6 | 63 | 0 | 57 | 170 | 7287256 | 7287143 | Pendulispora rubella strain MSr11368 chromosome, complete genome | blastn | 27662 | 178 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Pendulisporaceae | Pendulispora | Pendulispora rubella | ||
| 13338921 | 13338921 | PRJNA608660_P_NODE_42311_length_179_cov_3.815385_g41954_i0 | PRJNA608660 | 42311 | 179 | 3.815385 | 6.82953915 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 189 | 1.1099999999999999e-43 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g41954 | i0 | 88.05 | 161.184357541899 | 159 | 19 | 89 | 0 | 6 | 164 | 1311862 | 1312020 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 28852 | 189 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 15175220 | 15175220 | PRJNA608660_P_NODE_3672_length_732_cov_19.862372_g3413_i0 | PRJNA608660 | 3672 | 732 | 19.862372 | 145.39256304 | Stigmatella | 40 | Bacteria | Bacteria | 907 | 0 | NTclustered | gi|507148216|ref|NR_103023.1| | 41 | g3413 | i0 | 94.836 | 250.821038251366 | 581 | 30 | 99 | 0 | 152 | 732 | 575 | 1155 | Stigmatella aurantiaca strain DW4/3-1 23S ribosomal RNA gene, complete sequence | blastn | 183601 | 907 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Stigmatella | Stigmatella aurantiaca | ||
| 15887420 | 15887420 | PRJNA608660_P_NODE_10353_length_463_cov_13.934783_g10008_i0 | PRJNA608660 | 10353 | 463 | 13.934783 | 64.51804529 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 95.1 | 8.17e-20 | NR | MBN2123032.1 | 2026735 | g10008 | i0 | 48.5 | 4.5939524838013 | 99 | 51 | 64.1 | 0 | 447 | 151 | 159 | 257 | MBN2123032.1 ABC transporter permease [Deltaproteobacteria bacterium] | diamond | 2127 | 95.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 15887759 | 15887759 | PRJNA608660_P_NODE_4953_length_651_cov_5.626246_g4657_i0 | PRJNA608660 | 4953 | 651 | 5.626246 | 36.62686146 | Archangium violaceum | 83451 | Bacteria | Bacteria | 588 | 3.989999999999999e-163 | NTclustered | gi|2579675135|gb|CP043493.1| | 83451 | g4657 | i0 | 83.308 | 266.282642089094 | 659 | 88 | 99 | 18 | 6 | 651 | 5179723 | 5180372 | Archangium violaceum strain Cbvi 34 chromosome, complete genome | blastn | 173350 | 588 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium violaceum | ||
| 19711124 | 19711124 | PRJNA608660_P_NODE_14856_length_380_cov_2.981873_g14503_i0 | PRJNA608660 | 14856 | 380 | 2.981873 | 11.3311174 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 272 | 2.55e-68 | NTclustered | gi|2258824976|gb|CP060221.1| | 2026763 | g14503 | i0 | 82.803 | 68.8710526315789 | 314 | 44 | 81 | 10 | 67 | 375 | 1312453 | 1312761 | MAG: Myxococcales bacterium isolate HK-STAS-MYXO-35 chromosome, complete genome | blastn | 26171 | 272 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 26872101 | 26872101 | PRJNA608660_P_NODE_5061_length_645_cov_4.981544_g4763_i0 | PRJNA608660 | 5061 | 645 | 4.981544 | 32.1309588 | root | 1 | Root_unresolved | Root_unresolved | 47.8 | 0.0125 | NR | MEO8551975.1 | 2212474 | g4763 | i0 | 33.8 | 1.95348837209302 | 74 | 49 | 34.4 | 0 | 47 | 268 | 90 | 163 | MEO8551975.1 hypothetical protein [Kofleriaceae bacterium] | diamond | 1260 | 47.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 28406633 | 28406633 | PRJNA608660_P_NODE_34286_length_212_cov_3.073620_g33930_i0 | PRJNA608660 | 34286 | 212 | 3.07362 | 6.5160744 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 65.1 | 3.27e-10 | NR | RLC27457.1 | 2026735 | g33930 | i0 | 53.6 | 1.95283018867925 | 69 | 32 | 97.6 | 0 | 2 | 208 | 694 | 762 | RLC27457.1 MAG: CRISPR-associated endonuclease Cas1 [Deltaproteobacteria bacterium] | diamond | 414 | 65.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28501360 | 28501360 | PRJNA608660_P_NODE_21587_length_299_cov_3.632000_g21231_i0 | PRJNA608660 | 21587 | 299 | 3.632 | 10.859680000000001 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 44.7 | 0.00247 | NR | HNC97725.1 | 2818507 | g21231 | i0 | 40.3 | 0.622073578595318 | 62 | 26 | 51.2 | 1 | 245 | 93 | 17 | 78 | HNC97725.1 hypothetical protein [Myxococcota bacterium] | diamond | 186 | 44.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 28501362 | 28501362 | PRJNA608660_P_NODE_29087_length_241_cov_1.604167_g28731_i0 | PRJNA608660 | 29087 | 241 | 1.604167 | 3.86604247 | Nannocystis sp. | 1962667 | Bacteria | Bacteria | 99.4 | 3.88e-22 | NR | WP_293259433.1 | 1962667 | g28731 | i0 | 78.5 | 0.983402489626556 | 79 | 16 | 98.3 | 1 | 4 | 240 | 201 | 278 | WP_293259433.1 tetratricopeptide repeat protein [Nannocystis sp.] | diamond | 237 | 99.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Nannocystales | Nannocystaceae | Nannocystis | Nannocystis sp. | |||
| 28911425 | 28911425 | PRJNA608660_P_NODE_27188_length_253_cov_2.318627_g26832_i0 | PRJNA608660 | 27188 | 253 | 2.318627 | 5.86612631 | Polyangiaceae bacterium LLY-WYZ-14_1 | 3034331 | Bacteria | Bacteria | 42.4 | 0.0412 | NR | HJK99605.1 | 3034331 | g26832 | i0 | 36.8 | 0.806324110671937 | 68 | 40 | 80.6 | 2 | 239 | 36 | 53 | 117 | HJK99605.1 GNAT family N-acetyltransferase [Polyangiaceae bacterium LLY-WYZ-14_1] | diamond | 204 | 42.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium LLY-WYZ-14_1 |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;