RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA608660", tax_kingdom = "Metazoa" and tax_phylum = "Echinodermata"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Echinodermata · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA608660 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1860623 1860623 PRJNA608660_P_NODE_29662_length_237_cov_4.127660_g29306_i0 PRJNA608660 29662 237 4.12766 9.7825542 Anneissia japonica 1529436 Echinodermata other_Eukaryota 115 2.67e-21   NTclustered gi|1826632728|ref|XM_033249083.1| 1529436 g29306 i0 89.888 22.8481012658228 89 9 38 0 135 223 1345 1257 PREDICTED: Anneissia japonica tubulin alpha-8 chain-like (LOC117107408), mRNA blastn 5415 115 1 Eukaryota Opisthokonta Metazoa Echinodermata Crinoidea Comatulida Comatulidae Anneissia Anneissia japonica
19711361 19711361 PRJNA608660_P_NODE_41936_length_181_cov_1.250000_g41579_i0 PRJNA608660 41936 181 1.25 2.2625 Lytechinus pictus 7653 Echinodermata other_Eukaryota 52.8 0.015   NTclustered gi|2707454360|ref|XM_054908151.2| 7653 g41579 i0 100 0.154696132596685 28 0 15 0 20 47 2970 2997 PREDICTED: Lytechinus pictus MAP kinase-interacting serine/threonine-protein kinase 1-like (LOC129270821), transcript variant X1, mRNA blastn 28 52.8 1 Eukaryota Opisthokonta Metazoa Echinodermata Echinoidea Temnopleuroida Toxopneustidae Lytechinus Lytechinus pictus
30743622 30743622 PRJNA608660_P_NODE_7994_length_527_cov_4.905858_g7659_i0 PRJNA608660 7994 527 4.905858 25.85387166 Acanthaster planci 133434 Echinodermata other_Eukaryota 70.5 1.25e-10   NR XP_022093994.1 133434 g7659 i0 81.6 0.216318785578748 38 7 21.6 0 194 307 283 320 XP_022093994.1 uncharacterized protein LOC110981078 [Acanthaster planci] diamond 114 70.5 1 Eukaryota Opisthokonta Metazoa Echinodermata Asteroidea Valvatida Acanthasteridae Acanthaster Acanthaster planci

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;