RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA608660", tax_kingdom = "Metazoa" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA608660 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4975051 4975051 PRJNA608660_P_NODE_30524_length_232_cov_3.404372_g30168_i0 PRJNA608660 30524 232 3.404372 7.89814304 Enchytraeus 6389 Annelida Annelida 320 5.15e-83   NTclustered gi|316990131|gb|GU901870.1| 6390 g30168 i0 100 100.495689655172 173 0 100 0 1 173 347 175 Enchytraeus albidus isolate CE521 18S ribosomal RNA gene, partial sequence blastn 23315 320 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Enchytraeida Enchytraeidae Enchytraeus Enchytraeus albidus
20986989 20986989 PRJNA608660_P_NODE_2537_length_839_cov_5.507595_g2319_i0 PRJNA608660 2537 839 5.507595 46.20872205 Hirudo verbana 311461 Annelida Annelida 54.7 0.023   NTclustered gi|2918369613|emb|OZ237779.1| 311461 g2319 i0 100 0.034564958283671 29 0 3 0 272 300 1277034 1277062 Hirudo verbana genome assembly, chromosome: 1 blastn 29 54.7 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Hirudinida Hirudinidae Hirudo Hirudo verbana
20987219 20987219 PRJNA608660_P_NODE_48757_length_163_cov_5.956140_g48400_i0 PRJNA608660 48757 163 5.95614 9.7085082 Ailoscolex lacteospumosus 1046305 Annelida Annelida 62.1 2.26e-5   NTclustered gi|2920003563|emb|OZ238869.1| 1046305 g48400 i0 77.982 0.668711656441718 109 17 63 4 1 103 20521808 20521701 Ailoscolex lacteospumosus genome assembly, chromosome: 10 blastn 109 62.1 1 Eukaryota Opisthokonta Metazoa Annelida Clitellata Crassiclitellata Ailoscolecidae Ailoscolex Ailoscolex lacteospumosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;