RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA608660", tax_kingdom = "Fungi" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 3 ✖

tax_kingdom 1

  • Fungi · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA608660 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3135460 3135460 PRJNA608660_P_NODE_19963_length_316_cov_2.048689_g19607_i0 PRJNA608660 19963 316 2.048689 6.47385724 Entomophthora muscae 34485 Fungi Fungi 303 7.4e-78   NTclustered gi|82398173|gb|DQ273772.1| 34485 g19607 i0 84.839 34.2594936708861 310 37 97 9 9 314 2010 1707 Entomophthora muscae isolate AFTOL-ID 28 28S ribosomal RNA gene, partial sequence blastn 10826 303 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Entomophthora Entomophthora muscae
6963031 6963031 PRJNA608660_P_NODE_35166_length_208_cov_2.496855_g34810_i0 PRJNA608660 35166 208 2.496855 5.1934584 Pandora neoaphidis 76017 Fungi Fungi 361 2.67e-95   NTclustered gi|166812027|gb|EU267193.1| 76017 g34810 i0 99.495 95.1923076923077 198 1 95 0 11 208 1010 813 Pandora neoaphidis ARSEF 7939 pn7939-3 MboI- pattern 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 25S ribosomal RNA gene, partial sequence blastn 19800 361 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora neoaphidis
17724920 17724920 PRJNA608660_P_NODE_46134_length_168_cov_1.201681_g45777_i0 PRJNA608660 46134 168 1.201681 2.01882408 Entomophthoraceae 34481 Fungi Fungi 287 3.55e-73   NTclustered gi|358441813|gb|JQ014018.1| 42210 g45777 i0 98.758 91.4523809523809 161 2 96 0 1 161 1443 1603 Erynia radicans strain CSB 607.92 18S ribosomal RNA (SSU) gene, partial sequence blastn 15364 287 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Zoophthora Zoophthora radicans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;