RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA608660", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 4 ✖

tax_kingdom 1

  • Bacillati · 4 ✖

bioproject 1

  • PRJNA608660 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15887715 15887715 PRJNA608660_P_NODE_44093_length_173_cov_3.975806_g43736_i0 PRJNA608660 44093 173 3.975806 6.87814438 Candidatus Izemoplasma sp. B36 3242468 Bacteria Bacteria 182 1.78e-41   NTclustered gi|2794178705|gb|CP168077.1| 3242468 g43736 i0 91.045 266.838150289017 134 12 77 0 29 162 1044864 1044997 Candidatus Izemoplasma sp. B36 chromosome, complete genome blastn 46163 182 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales Candidatus Izemoplasmataceae Candidatus Izemoplasma Candidatus Izemoplasma sp. B36
24811126 24811126 PRJNA608660_P_NODE_43900_length_174_cov_1.664000_g43543_i0 PRJNA608660 43900 174 1.664 2.89536 Mycoplasmatota bacterium WC30 3075149 Bacteria Bacteria 226 8.149999999999998e-55   NTclustered gi|2877983046|gb|CP134495.1| 3075149 g43543 i0 92.903 247.281609195402 155 11 89 0 10 164 1388785 1388939 Mycoplasmatota bacterium WC30 chromosome, complete genome blastn 43027 226 1 Bacteria   Bacillati Mycoplasmatota         Mycoplasmatota bacterium WC30
32198213 32198213 PRJNA608660_P_NODE_21498_length_300_cov_2.836653_g21142_i0 PRJNA608660 21498 300 2.836653 8.509959 Candidatus Izemoplasmatales bacterium 3018265 Bacteria Bacteria 144 2.53e-39   NR MDY0024322.1 3018265 g21142 i0 66.7 4.68 93 31 93 0 16 294 186 278 MDY0024322.1 CTP synthase [Candidatus Izemoplasmatales bacterium] diamond 1404 144 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales     Candidatus Izemoplasmatales bacterium
32672177 32672177 PRJNA608660_P_NODE_11840_length_431_cov_22.968586_g11493_i0 PRJNA608660 11840 431 22.968586 98.99460566 Candidatus Izemoplasmatales bacterium 3018265 Bacteria Bacteria 123 1.56e-32   NR HRY78598.1 3018265 g11493 i0 88.7 0.431554524361949 62 7 43.2 0 18 203 108 169 HRY78598.1 nitroreductase family protein [Candidatus Izemoplasmatales bacterium] diamond 186 123 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales     Candidatus Izemoplasmatales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;