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contig_metadata

25 rows where bioproject = "PRJNA608660" and tax_clade = "Sar"

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analysis 2

tax_superkingdom 1

tax_clade 1

  • Sar · 25 ✖

bioproject 1

  • PRJNA608660 · 25 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2422111 2422111 PRJNA608660_P_NODE_14422_length_386_cov_5.765579_g14070_i0 PRJNA608660 14422 386 5.765579 22.25513494 Spumellaria 65583 SAR_Eukaryotes SAR_Eukaryotes 110 2.16e-19   NTclustered gi|651078391|dbj|AB860150.1| 366596 g14070 i0 94.366 19.6658031088083 71 4 18 0 15 85 4361 4291 Spongopyle osculosa genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, partial and complete sequence, isolate: KH1004_658 blastn 7591 111 0.990990990990991 Eukaryota Sar     Polycystinea Spumellaria Spongodiscidae Spongopyle Spongopyle osculosa
2422196 2422196 PRJNA608660_P_NODE_35902_length_205_cov_1.333333_g35546_i0 PRJNA608660 35902 205 1.333333 2.73333265 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 379 7.229999999999999e-101   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g35546 i0 100 9.69268292682927 205 0 100 0 1 205 1073 869 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 1987 379 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
5688580 5688580 PRJNA608660_P_NODE_4725_length_664_cov_3.721951_g4433_i0 PRJNA608660 4725 664 3.721951 24.71375464 uncultured stramenopile 152704 SAR_Eukaryotes SAR_Eukaryotes 640 1.11e-178   NTclustered gi|460423894|gb|KC306509.1| 152704 g4433 i0 98.889 38.9457831325301 360 1 95 2 14 373 357 1 Uncultured stramenopile clone BT_Euk_E2 18S ribosomal RNA gene, partial sequence blastn 25860 640 1 Eukaryota Sar             uncultured stramenopile
6962878 6962878 PRJNA608660_P_NODE_19506_length_321_cov_2.113971_g19150_i0 PRJNA608660 19506 321 2.113971 6.78584691 uncultured Sphenoderia 1938481 SAR_Eukaryotes SAR_Eukaryotes 207 6.07e-49   NTclustered gi|1723854338|gb|MN323346.1| 1938481 g19150 i0 88.889 54.0218068535826 171 15 53 4 8 176 287 119 Uncultured Sphenoderia clone OTU1253 small subunit ribosomal RNA gene, partial sequence blastn 17341 207 1 Eukaryota Sar   Cercozoa Imbricatea Euglyphida Sphenoderiidae   uncultured Sphenoderia
11350382 11350382 PRJNA608660_P_NODE_36029_length_204_cov_2.593548_g35673_i0 PRJNA608660 36029 204 2.593548 5.29083792 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 60.2 1.06e-4   NTclustered gi|342161706|gb|HQ651784.1| 413940 g35673 i0 92.5 0.774509803921569 40 3 20 0 32 71 3568 3529 Hexacontium pachydermum isolate 86 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 158 60.2 1 Eukaryota Sar     Polycystinea Spumellaria Actinommidae Hexacontium Hexacontium pachydermum
11350434 11350434 PRJNA608660_P_NODE_50509_length_157_cov_2.351852_g50152_i0 PRJNA608660 50509 157 2.351852 3.69240764 Glissomonadida 1238681 SAR_Eukaryotes SAR_Eukaryotes 279 5.46e-71   NTclustered gi|2030163897|gb|MZ044034.1| 1808984 g50152 i0 100 35.2292993630573 151 0 96 0 2 152 402 552 Rosculus terrestris isolate S14D1 small subunit ribosomal RNA gene, partial sequence blastn 5531 279 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus terrestris
12625993 12625993 PRJNA608660_P_NODE_47830_length_165_cov_1.344828_g47473_i0 PRJNA608660 47830 165 1.344828 2.2189662 Guttulinopsis 1144921 SAR_Eukaryotes SAR_Eukaryotes 267 4.53e-67   NTclustered gi|1402550487|gb|MH488773.1| 2231167 g47473 i0 95.808 9.64848484848485 167 4 100 3 1 165 807 642 Guttulinopsis sp. isolate STA small subunit ribosomal RNA gene, partial sequence blastn 1592 267 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Guttulinopsis Guttulinopsis sp.
13338669 13338669 PRJNA608660_P_NODE_16231_length_360_cov_3.900322_g15877_i0 PRJNA608660 16231 360 3.900322 14.0411592 Rosculus vulgaris 2231165 SAR_Eukaryotes SAR_Eukaryotes 248 4.05e-61   NTclustered gi|1402550474|gb|MH488760.1| 2231165 g15877 i0 81.346 24.7666666666667 327 41 89 15 39 360 2867 2556 Rosculus vulgaris isolate CCA sequence blastn 8916 248 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus vulgaris
13900813 13900813 PRJNA608660_P_NODE_11991_length_428_cov_26.751979_g11644_i0 PRJNA608660 11991 428 26.751979 114.49847012 Sargassaceae 3014 SAR_Eukaryotes SAR_Eukaryotes 621 2.51e-173   NTclustered gi|2307923332|ref|NC_066457.1| 3016 g11644 i0 94.962 180.941588785047 397 19 93 1 15 410 76344 76740 Sargassum fulvellum chloroplast, complete genome blastn 77443 621 1 Eukaryota Sar     Phaeophyceae Fucales Sargassaceae Sargassum Sargassum fulvellum
13900889 13900889 PRJNA608660_P_NODE_30631_length_232_cov_1.174863_g30275_i0 PRJNA608660 30631 232 1.174863 2.72568216 Cryomonadida 589444 SAR_Eukaryotes SAR_Eukaryotes 257 4.1e-64   NTclustered gi|1185383841|gb|KY977288.1| 1979837 g30275 i0 95.152 60.3793103448276 165 5 71 3 69 232 90 252 Protaspa sp. isolate Otu002897 small subunit ribosomal RNA gene, partial sequence blastn 14008 259 0.992277992277992 Eukaryota Sar   Cercozoa Thecofilosea Cryomonadida Protaspidae Protaspa Protaspa sp.
20273472 20273472 PRJNA608660_P_NODE_6836_length_567_cov_6.222008_g6511_i0 PRJNA608660 6836 567 6.222008 35.27878536 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 130 2.51e-25   NTclustered gi|1031965308|gb|KX011113.1| 933485 g6511 i0 80.226 26.1446208112875 177 31 31 4 42 216 4828 4654 Maullinia ectocarpi isolate CCAP 1538/1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14824 130 1 Eukaryota Sar   Endomyxa Phytomyxea Phagomyxida   Maullinia Maullinia ectocarpi
20986965 20986965 PRJNA608660_P_NODE_23477_length_282_cov_2.197425_g23121_i0 PRJNA608660 23477 282 2.197425 6.1967385 Hantzschia amphioxys 186034 SAR_Eukaryotes SAR_Eukaryotes 429 1.03e-115   NTclustered gi|725539095|gb|KM407568.1| 186034 g23121 i0 97.976 93.2198581560284 247 5 88 0 36 282 1 247 Hantzschia amphioxys isolate Ant025-E04 28S ribosomal RNA gene, partial sequence blastn 26288 429 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Bacillariales Bacillariaceae Hantzschia Hantzschia amphioxys
20987244 20987244 PRJNA608660_P_NODE_5817_length_608_cov_4.486583_g5508_i0 PRJNA608660 5817 608 4.486583 27.27842464 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 955 0   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g5508 i0 95.515 15.1595394736842 602 19 98 8 13 608 1273 674 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 9217 955 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
22261796 22261796 PRJNA608660_P_NODE_29998_length_236_cov_0.973262_g29642_i0 PRJNA608660 29998 236 0.973262 2.29689832 Rosculus sp. 2231160 SAR_Eukaryotes SAR_Eukaryotes 394 3.05e-105   NTclustered gi|1402550473|gb|MH488759.1| 2231160 g29642 i0 97.403 2.97033898305085 231 6 98 0 1 231 162 392 Rosculus sp. isolate CSA small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 701 394 1 Eukaryota Sar   Cercozoa     Guttulinopsidae Rosculus Rosculus sp.
22824254 22824254 PRJNA608660_P_NODE_2658_length_826_cov_6.158301_g2433_i0 PRJNA608660 2658 826 6.158301 50.86756626 Eukaryota 2759 SAR_Eukaryotes SAR_Eukaryotes 130 3.73e-25   NTclustered gi|1031965308|gb|KX011113.1| 933485 g2433 i0 80.226 35.8934624697337 177 31 42 4 611 785 4654 4828 Maullinia ectocarpi isolate CCAP 1538/1 18S ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 29648 130 1 Eukaryota Sar   Endomyxa Phytomyxea Phagomyxida   Maullinia Maullinia ectocarpi
22824323 22824323 PRJNA608660_P_NODE_4498_length_676_cov_12.266348_g4210_i0 PRJNA608660 4498 676 12.266348 82.92051248 Tribonema 2980 SAR_Eukaryotes SAR_Eukaryotes 211 1.05e-49   NTclustered gi|2286039|emb|Y07979.1| 2981 g4210 i0 90.625 44.3683431952663 160 14 50 1 359 518 3099 3257 T.aequale 28S rRNA gene and ITS2 DNA blastn 29993 211 1 Eukaryota Sar     Xanthophyceae Tribonematales Tribonemataceae Tribonema Tribonema aequale
23537241 23537241 PRJNA608660_P_NODE_38119_length_195_cov_2.547945_g37763_i0 PRJNA608660 38119 195 2.547945 4.96849275 Odontella sp. (in: diatoms) 40357 SAR_Eukaryotes SAR_Eukaryotes 183 5.729999999999998e-42   NTclustered gi|1377545700|gb|MG835798.1| 40357 g37763 i0 88.667 0.769230769230769 150 17 77 0 1 150 626 775 Odontella sp. (in: Bacillariophyta) isolate SKLMP_B005 28S ribosomal RNA gene, partial sequence blastn 150 183 1 Eukaryota Sar   Bacillariophyta Mediophyceae Eupodiscales Odontellaceae Odontella Odontella sp. (in: diatoms)
24810845 24810845 PRJNA608660_P_NODE_15680_length_368_cov_1.583072_g15326_i0 PRJNA608660 15680 368 1.583072 5.82570496 Cyclospora cayetanensis 88456 SAR_Eukaryotes SAR_Eukaryotes 148 4.33e-31   NTclustered gi|160358922|gb|EU252544.1| 88456 g15326 i0 83.537 12.2717391304348 164 22 45 5 12 175 1516 1674 Cyclospora cayetanensis 28S large subunit ribosomal RNA gene, partial sequence blastn 4516 148 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Cyclospora Cyclospora cayetanensis
24811014 24811014 PRJNA608660_P_NODE_30820_length_231_cov_0.950549_g30464_i0 PRJNA608660 30820 231 0.950549 2.19576819 Phaeodactylum tricornutum 2850 SAR_Eukaryotes SAR_Eukaryotes 248 2.45e-61   NTclustered gi|146762526|gb|EF553458.1| 2850 g30464 i0 91.713 76.3766233766234 181 12 78 3 15 194 4280 4102 Phaeodactylum tricornutum strain CCAP 1055/1 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 17643 248 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Phaeodactylaceae Phaeodactylum Phaeodactylum tricornutum
27712356 27712356 PRJNA608660_P_NODE_23124_length_285_cov_2.644068_g22768_i0 PRJNA608660 23124 285 2.644068 7.5355938 Symbiodinium natans 878477 SAR_Eukaryotes SAR_Eukaryotes 43.9 0.0249   NR CAE7423836.1 878477 g22768 i0 41 1.23157894736842 39 23 41.1 0 84 200 1870 1908 CAE7423836.1 unnamed protein product [Symbiodinium natans] diamond 351 43.9 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium natans
28027748 28027748 PRJNA608660_P_NODE_37025_length_200_cov_1.476821_g36669_i0 PRJNA608660 37025 200 1.476821 2.953642 Eimeria acervulina 5801 SAR_Eukaryotes SAR_Eukaryotes 42 0.0408   NR XP_013253311.1 5801 g36669 i0 38.3 0.705 47 29 70.5 0 56 196 366 412 XP_013253311.1 hypothetical protein, conserved [Eimeria acervulina] diamond 141 42 1 Eukaryota Sar   Apicomplexa Conoidasida Eucoccidiorida Eimeriidae Eimeria Eimeria acervulina
28501365 28501365 PRJNA608660_P_NODE_49327_length_163_cov_0.912281_g48970_i0 PRJNA608660 49327 163 0.912281 1.48701803 Fistulifera solaris 1519565 SAR_Eukaryotes SAR_Eukaryotes 48.1 1.59e-4   NR GAX27481.1 1519565 g48970 i0 55.3 1.39877300613497 38 17 69.9 0 126 13 95 132 GAX27481.1 hypothetical protein FisN_23Hu053 [Fistulifera solaris] diamond 228 48.1 1 Eukaryota Sar   Bacillariophyta Bacillariophyceae Naviculales Naviculaceae Fistulifera Fistulifera solaris
31028147 31028147 PRJNA608660_P_NODE_13055_length_409_cov_2.427778_g12706_i0 PRJNA608660 13055 409 2.427778 9.92961202 Achlya hypogyna 1202772 SAR_Eukaryotes SAR_Eukaryotes 48.9 0.00154   NR OQR85564.1 1202772 g12706 i0 34.4 0.469437652811736 64 41 46.9 1 351 160 374 436 OQR85564.1 transmembrane protein [Achlya hypogyna] diamond 192 48.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Achlyaceae Achlya Achlya hypogyna
32766670 32766670 PRJNA608660_P_NODE_34400_length_212_cov_1.496933_g34044_i0 PRJNA608660 34400 212 1.496933 3.17349796 Tetraparma gracilis 2962635 SAR_Eukaryotes SAR_Eukaryotes 48.9 1.55e-4   NR GMI50407.1 2962635 g34044 i0 60 0.962264150943396 35 14 49.5 0 33 137 265 299 GMI50407.1 hypothetical protein TeGR_g12811 [Tetraparma gracilis] diamond 204 48.9 1 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Tetraparma Tetraparma gracilis
32842724 32842724 PRJNA608660_P_NODE_700_length_1243_cov_13.223618_g589_i0 PRJNA608660 700 1243 13.223618 164.36957174 Peronosporaceae 4777 SAR_Eukaryotes SAR_Eukaryotes 137 3.6199999999999997e-34   NR XP_067750673.1 164328 g589 i0 37.9 1.88736926790024 195 118 47.1 2 562 1146 1 192 XP_067750673.1 Vesicle-associated membrane protein 7B [Phytophthora ramorum] diamond 2346 138 0.992753623188406 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Phytophthora Phytophthora ramorum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;