RNAquarium Metadata Server
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contig_metadata

1 row where bioproject = "PRJNA608660", tax_clade = "Opisthokonta" and tax_phylum = "Bryozoa"

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tax_superkingdom 1

tax_phylum 1

  • Bryozoa · 1 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 1 ✖

bioproject 1

  • PRJNA608660 · 1 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16449586 16449586 PRJNA608660_P_NODE_21473_length_300_cov_6.071713_g21117_i0 PRJNA608660 21473 300 6.071713 18.215139 Thalamoporellidae 97292 Bryozoa other_Eukaryota 84.2 9.9e-12   NTclustered gi|2075442530|gb|MZ677793.1| 2865220 g21117 i0 80 11.7666666666667 115 22 38 1 176 289 3706 3592 Thalamoporella sp. BLEED1037 large subunit ribosomal RNA gene, partial sequence blastn 3530 84.2 1 Eukaryota Opisthokonta Metazoa Bryozoa Gymnolaemata Cheilostomatida Thalamoporellidae Thalamoporella Thalamoporella sp. BLEED1037

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;