contig_metadata
6 rows where bioproject = "PRJNA608660", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5688408 | 5688408 | PRJNA608660_P_NODE_31345_length_227_cov_8.483146_g30989_i0 | PRJNA608660 | 31345 | 227 | 8.483146 | 19.25674142 | uncultured Gemmatimonadales bacterium | 412054 | Bacteria | Bacteria | 250 | 6.68e-62 | NTclustered | gi|2874253789|emb|OY969773.1| | 412054 | g30989 | i0 | 88.725 | 109.629955947137 | 204 | 23 | 90 | 0 | 10 | 213 | 420971 | 420768 | MAG: uncultured Gemmatimonadales bacterium isolate MFD04580.bin.2.49 genome assembly, chromosome: 1 | blastn | 24886 | 250 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | uncultured Gemmatimonadales bacterium | |||
| 8237946 | 8237946 | PRJNA608660_P_NODE_51047_length_152_cov_2.951456_g50690_i0 | PRJNA608660 | 51047 | 152 | 2.951456 | 4.48621312 | Bacteria | 2 | Bacteria | Bacteria | 80.9 | 3.85e-16 | NR | WP_343123350.1 | 861299 | g50690 | i0 | 100 | 841.835526315789 | 38 | 0 | 75 | 0 | 36 | 149 | 421 | 458 | WP_343123350.1 DNA-directed RNA polymerase subunit beta' [Gemmatirosa kalamazoonensis] | diamond | 127959 | 81.3 | 0.995079950799508 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatirosa | Gemmatirosa kalamazoonensis | |
| 29682326 | 29682326 | PRJNA608660_P_NODE_36870_length_201_cov_0.980263_g36514_i0 | PRJNA608660 | 36870 | 201 | 0.980263 | 1.97032863 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 42.7 | 0.0215 | NR | HQW66995.1 | 2448054 | g36514 | i0 | 46.2 | 1.55223880597015 | 52 | 26 | 77.6 | 2 | 33 | 188 | 385 | 434 | HQW66995.1 hypothetical protein [Gemmatimonadales bacterium] | diamond | 312 | 42.7 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30079935 | 30079935 | PRJNA608660_P_NODE_42732_length_178_cov_1.612403_g42375_i0 | PRJNA608660 | 42732 | 178 | 1.612403 | 2.87007734 | Gemmatimonadales bacterium | 2448054 | Bacteria | Bacteria | 127 | 1.63e-32 | NR | HEY7481281.1 | 2448054 | g42375 | i0 | 100 | 0.960674157303371 | 57 | 0 | 96.1 | 0 | 176 | 6 | 188 | 244 | HEY7481281.1 prolyl oligopeptidase family serine peptidase [Gemmatimonadales bacterium] | diamond | 171 | 127 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadales bacterium | |||
| 30630245 | 30630245 | PRJNA608660_P_NODE_42293_length_179_cov_7.823077_g41936_i0 | PRJNA608660 | 42293 | 179 | 7.823077 | 14.00330783 | Bacteria | 2 | Bacteria | Bacteria | 50.1 | 4.04e-5 | NR | UCC71202.1 | 2026742 | g41936 | i0 | 55.6 | 1.5586592178771 | 45 | 20 | 75.4 | 0 | 18 | 152 | 244 | 288 | UCC71202.1 MAG: site-2 protease family protein [Gemmatimonadota bacterium] | diamond | 279 | 50.1 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadota bacterium | |||||
| 30711964 | 30711964 | PRJNA608660_P_NODE_10654_length_457_cov_4.345588_g10308_i0 | PRJNA608660 | 10654 | 457 | 4.345588 | 19.85933716 | Gemmatimonadaceae bacterium | 2026741 | Bacteria | Bacteria | 75.5 | 3.47e-13 | NR | MEP7348256.1 | 2026741 | g10308 | i0 | 94.7 | 0.5054704595186 | 38 | 2 | 24.9 | 0 | 13 | 126 | 214 | 251 | MEP7348256.1 SDR family oxidoreductase [Gemmatimonadaceae bacterium] | diamond | 231 | 75.5 | 1 | Bacteria | FCB group | Pseudomonadati | Gemmatimonadota | Gemmatimonadia | Gemmatimonadales | Gemmatimonadaceae | Gemmatimonadaceae bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;