RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA606583", tax_phylum = "Negarnaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Negarnaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA606583 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
14612482 14612482 PRJNA606583_P_NODE_12832_length_364_cov_1095.085627_g12404_i0 PRJNA606583 12832 364 1095.085627 3986.11168228 Lycium betacytorhabdovirus 1 3078349 Viruses Viruses 130 1.55e-25   NTclustered gi|2618835662|tpg|BK064324.1| 3078349 g12404 i0 100 2.01373626373626 70 0 35 0 177 246 70 1 TPA_asm: Lycium betacytorhabdovirus 1 cRNA sequence blastn 733 130 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Rhabdoviridae   Lycium betacytorhabdovirus 1
29795639 29795639 PRJNA606583_P_NODE_26571_length_213_cov_1.772727_g26142_i0 PRJNA606583 26571 213 1.772727 3.77590851 Salarius guttatus piscichuvirus 2951531 Viruses Viruses 47.4 5.95e-4   NR UVF58767.1 2951531 g26142 i0 36.1 0.859154929577465 61 39 85.9 0 30 212 90 150 UVF58767.1 MAG: L protein [Salarius guttatus piscichuvirus] diamond 183 47.4 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Jingchuvirales Chuviridae Piscichuvirus Salarius guttatus piscichuvirus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;