RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA606583" and tax_phylum = "Cnidaria"

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tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA606583 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18435689 18435689 PRJNA606583_P_NODE_32075_length_184_cov_1.591837_g31646_i0 PRJNA606583 32075 184 1.591837 2.92898008 Clytia hemisphaerica 252671 Cnidaria other_Eukaryota 52.8 0.016   NTclustered gi|2782839894|ref|XM_067055043.1| 252671 g31646 i0 100 0.304347826086957 28 0 15 0 63 90 7988 7961 PREDICTED: Clytia hemisphaerica uncharacterized protein (LOC136798434), transcript variant X2, mRNA blastn 56 52.8 1 Eukaryota Opisthokonta Metazoa Cnidaria Hydrozoa Leptothecata Clytiidae Clytia Clytia hemisphaerica
22260626 22260626 PRJNA606583_P_NODE_16118_length_312_cov_3.938182_g15689_i0 PRJNA606583 16118 312 3.938182 12.28712784 Acropora muricata 159855 Cnidaria other_Eukaryota 137 7.83e-28   NTclustered gi|2784714900|ref|XR_010871610.1| 159855 g15689 i0 75.61 8.3974358974359 287 64 91 6 25 308 603 320 PREDICTED: Acropora muricata uncharacterized lncRNA (LOC136918353), ncRNA blastn 2620 137 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;