RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA606583", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 3 ✖

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA606583 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
15174576 15174576 PRJNA606583_P_NODE_23712_length_234_cov_1.385787_g23283_i0 PRJNA606583 23712 234 1.385787 3.24274158 Metazoa 33208 Mollusca Mollusca 433 6.41e-117   NTclustered gi|1928112764|gb|MT947788.1| 6523 g23283 i0 100 99.982905982906 234 0 100 0 1 234 112 345 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 23396 433 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
30269936 30269936 PRJNA606583_P_NODE_36252_length_168_cov_1.190840_g35823_i0 PRJNA606583 36252 168 1.19084 2.0006112 Pinctada imbricata 66713 Mollusca Mollusca 42.7 0.014   NR KAK3095181.1 66713 g35823 i0 45.5 3.94642857142857 44 24 78.6 0 10 141 243 286 KAK3095181.1 hypothetical protein FSP39_011146 [Pinctada imbricata] diamond 663 42.7 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Pterioida Pteriidae Pinctada Pinctada imbricata
30459674 30459674 PRJNA606583_P_NODE_23473_length_235_cov_3.348485_g23044_i0 PRJNA606583 23473 235 3.348485 7.86893975 Mytilus edulis 6550 Mollusca Mollusca 47.8 5.19e-4   NR CAG2187267.1 6550 g23044 i0 44.6 0.714893617021277 56 25 63.8 2 155 6 192 247 CAG2187267.1 unnamed protein product [Mytilus edulis] diamond 168 47.8 1 Eukaryota Opisthokonta Metazoa Mollusca Bivalvia Mytilida Mytilidae Mytilus Mytilus edulis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;