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contig_metadata

8 rows where bioproject = "PRJNA606583", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 8 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 8 ✖

bioproject 1

  • PRJNA606583 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3698074 3698074 PRJNA606583_P_NODE_35423_length_170_cov_8.436090_g34994_i0 PRJNA606583 35423 170 8.43609 14.341353 Rhizopus 4842 Fungi Fungi 315 1.64e-81   NTclustered gi|358441405|gb|JN939136.1| 64495 g34994 i0 100 72.6294117647059 170 0 100 0 1 170 691 860 Rhizopus oryzae strain FSU 8743 28S ribosomal RNA (LSU) gene, partial sequence blastn 12347 315 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
5687300 5687300 PRJNA606583_P_NODE_31465_length_187_cov_1.040000_g31036_i0 PRJNA606583 31465 187 1.04 1.9448 Rhizopus arrhizus 64495 Fungi Fungi 344 2.36e-90   NTclustered gi|58578599|ref|NC_006836.1| 64495 g31036 i0 100 51.4010695187166 186 0 99 0 2 187 6192 6377 Rhizopus oryzae mitochondrion, complete genome blastn 9612 344 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus arrhizus
13900568 13900568 PRJNA606583_P_NODE_6111_length_548_cov_13.434442_g5702_i0 PRJNA606583 6111 548 13.434442 73.62074216 Rhizopus 4842 Fungi Fungi 1005 0   NTclustered gi|734668970|gb|KJ408534.1| 4846 g5702 i0 100 99.3211678832117 544 0 99 0 1 544 456 999 Rhizopus stolonifer strain FSU763 18S ribosomal RNA gene, partial sequence blastn 54428 1007 0.998013902681231 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
18998105 18998105 PRJNA606583_P_NODE_9175_length_444_cov_11.928747_g8752_i0 PRJNA606583 9175 444 11.928747 52.96363668 Rhizopus 4842 Fungi Fungi 787 0   NTclustered gi|1026666557|gb|KU058197.1| 1836680 g8752 i0 99.087 93.9324324324324 438 4 99 0 6 443 252 689 Rhizopus koreanus strain EML-HO95-2 28S ribosomal RNA gene, partial sequence blastn 41706 787 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus koreanus
21548492 21548492 PRJNA606583_P_NODE_42657_length_150_cov_11.008850_g42228_i0 PRJNA606583 42657 150 11.00885 16.513275 Rhizopus 4842 Fungi Fungi 278 1.85e-70   NTclustered gi|409185768|gb|JN206366.1| 1303102 g42228 i0 100 99.96 150 0 100 0 1 150 402 253 Rhizopus sp. CBS 926.87 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 14994 278 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus sp. CBS 926.87
22260705 22260705 PRJNA606583_P_NODE_2938_length_748_cov_12.361463_g2619_i0 PRJNA606583 2938 748 12.361463 92.46374324 Cokeromyces recurvatus 90255 Fungi Fungi 946 0   NTclustered gi|82398548|gb|DQ273812.1| 90255 g2619 i0 89.75 99.2272727272727 761 49 100 23 1 748 2325 1581 Cokeromyces recurvatus isolate AFTOL-ID 627 28S ribosomal RNA gene, partial sequence blastn 74222 946 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Cokeromyces Cokeromyces recurvatus
25372487 25372487 PRJNA606583_P_NODE_15820_length_316_cov_11.311828_g15391_i0 PRJNA606583 15820 316 11.311828 35.74537648 Rhizopus 4842 Fungi Fungi 575 1.4199999999999995e-159   NTclustered gi|336126962|gb|HM172866.1| 4846 g15391 i0 99.371 100.503164556962 318 0 100 1 1 316 319 2 Rhizopus stolonifer culture-collection FSU<DEU>:9868 18S small subunit ribosomal RNA gene, partial sequence blastn 31759 575 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus stolonifer
32546442 32546442 PRJNA606583_P_NODE_19179_length_276_cov_2.108787_g18750_i0 PRJNA606583 19179 276 2.108787 5.82025212 Parasitella parasitica 35722 Fungi Fungi 87.4 2.04e-20   NR KAI8637104.1 35722 g18750 i0 72.3 0.706521739130435 65 18 70.7 0 1 195 5 69 KAI8637104.1 hypothetical protein BD408DRAFT_425109, partial [Parasitella parasitica] diamond 195 87.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mucoraceae Parasitella Parasitella parasitica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;