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contig_metadata

18 rows where bioproject = "PRJNA605033" and tax_phylum = "Thermodesulfobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Thermodesulfobacteriota · 18 ✖

tax_kingdom 1

bioproject 1

  • PRJNA605033 · 18 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
582927 582927 PRJNA605033_P_NODE_54941_length_232_cov_5.908629_g53373_i0 PRJNA605033 54941 232 5.908629 13.70801928 Desulfatibacillum aliphaticivorans 218208 Bacteria Bacteria 75 4.43e-9   NTclustered gi|218759244|gb|CP001322.1| 218208 g53373 i0 97.674 0.185344827586207 43 1 19 0 152 194 2833497 2833455 Desulfatibacillum aliphaticivorans strain AK-01, complete genome blastn 43 75 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfatibacillaceae Desulfatibacillum Desulfatibacillum aliphaticivorans
1857959 1857959 PRJNA605033_P_NODE_197722_length_167_cov_1.113636_g196153_i0 PRJNA605033 197722 167 1.113636 1.85977212 Desulfosarcina alkanivorans 571177 Bacteria Bacteria 52.8 0.014   NTclustered gi|1773409569|dbj|AP021874.1| 571177 g196153 i0 100 0.167664670658683 28 0 17 0 2 29 5802817 5802844 Desulfosarcina alkanivorans PL12 DNA, complete genome blastn 28 52.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfosarcinaceae Desulfosarcina Desulfosarcina alkanivorans
13899709 13899709 PRJNA605033_P_NODE_55971_length_231_cov_2.806122_g54403_i0 PRJNA605033 55971 231 2.806122 6.48214182 Nitratidesulfovibrio 2802295 Bacteria Bacteria 93.5 1.22e-14   NTclustered gi|2431395895|gb|CP116246.1| 881 g54403 i0 81.667 3.22077922077922 120 14 50 7 1 116 326091 326206 Nitratidesulfovibrio vulgaris strain L2 chromosome, complete genome blastn 744 93.5 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Nitratidesulfovibrio Nitratidesulfovibrio vulgaris
19709176 19709176 PRJNA605033_P_NODE_27656_length_286_cov_1.876494_g26091_i0 PRJNA605033 27656 286 1.876494 5.36677284 Pseudomonadati 3379134 Bacteria Bacteria 74.3 3.21e-13   NR WP_027714398.1 1232410 g26091 i0 71.7 2.89510489510489 46 13 48.3 0 149 286 193 238 WP_027714398.1 zinc-dependent alcohol dehydrogenase family protein [Desulfuromonas sp. TF] diamond 828 74.7 0.994645247657296 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Desulfuromonadales Desulfuromonadaceae Desulfuromonas Desulfuromonas sp. TF
26731529 26731529 PRJNA605033_P_NODE_93101_length_222_cov_2.112299_g91532_i0 PRJNA605033 93101 222 2.112299 4.68930378 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 40.4 0.0271   NR HLA50914.1 2202153 g91532 i0 66.7 0.324324324324324 24 8 32.4 0 1 72 32 55 HLA50914.1 hypothetical protein [Thermodesulfobacteriota bacterium] diamond 72 40.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
26953353 26953353 PRJNA605033_P_NODE_61962_length_224_cov_2.634921_g60393_i0 PRJNA605033 61962 224 2.634921 5.90222304 uncultured Desulfobulbus sp. 239745 Bacteria Bacteria 45.1 0.0045   NR WP_319586187.1 239745 g60393 i0 61.3 1.20535714285714 31 12 41.5 0 130 222 345 375 WP_319586187.1 glycoside hydrolase family 3 C-terminal domain-containing protein [uncultured Desulfobulbus sp.] diamond 270 45.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus uncultured Desulfobulbus sp.
27490978 27490978 PRJNA605033_P_NODE_89203_length_222_cov_2.208556_g87634_i0 PRJNA605033 89203 222 2.208556 4.90299432 Candidatus Dadabacteria bacterium 2080303 Bacteria Bacteria 47.4 6.46e-4   NR RMF14029.1 2080303 g87634 i0 92 0.675675675675676 25 2 33.8 0 222 148 13 37 RMF14029.1 MAG: GDP-L-fucose synthase [Candidatus Dadabacteria bacterium] diamond 150 47.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Candidatus Dadabacteria       Candidatus Dadabacteria bacterium
27617271 27617271 PRJNA605033_P_NODE_160844_length_186_cov_1.549669_g159275_i0 PRJNA605033 160844 186 1.549669 2.88238434 Dissulfuribacterales bacterium 3050474 Bacteria Bacteria 45.4 0.00195   NR MEZ0328300.1 3050474 g159275 i0 46.9 1.61290322580645 49 26 79 0 167 21 1003 1051 MEZ0328300.1 6-hydroxymethylpterin diphosphokinase MptE-like protein [Dissulfuribacterales bacterium] diamond 300 45.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Dissulfuribacteria Dissulfuribacterales     Dissulfuribacterales bacterium
27680602 27680602 PRJNA605033_P_NODE_169124_length_181_cov_1.061644_g167555_i0 PRJNA605033 169124 181 1.061644 1.92157564 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 45.8 2.49e-4   NR MEW6350267.1 2202153 g167555 i0 51.1 2.2707182320442 45 20 74.6 1 1 135 45 87 MEW6350267.1 type II toxin-antitoxin system RelE/ParE family toxin [Thermodesulfobacteriota bacterium] diamond 411 45.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
27819943 27819943 PRJNA605033_P_NODE_208264_length_162_cov_3.905512_g206695_i0 PRJNA605033 208264 162 3.905512 6.32692944 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 54.3 1.01e-6   NR WP_207680843.1 45655 g206695 i0 49.1 5.7962962962963 53 24 98.1 1 160 2 425 474 WP_207680843.1 response regulator [Desulfonema magnum] diamond 939 54.3 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfococcaceae Desulfonema Desulfonema magnum
27851215 27851215 PRJNA605033_P_NODE_241004_length_152_cov_1.367521_g239435_i0 PRJNA605033 241004 152 1.367521 2.07863192 Desulfuromonadia 3031651 Bacteria Bacteria 60.8 2.06e-9   NR WP_223907274.1 1566346 g239435 i0 58 3.94736842105263 50 20 98.7 1 151 2 136 184 WP_223907274.1 hypothetical protein [Geobacter sp. AOG1] diamond 600 60.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfuromonadia Geobacterales Geobacteraceae Geobacter Geobacter sp. AOG1
28911352 28911352 PRJNA605033_P_NODE_164948_length_183_cov_2.256757_g163379_i0 PRJNA605033 164948 183 2.256757 4.12986531 Desulfobacterales bacterium 2044940 Bacteria Bacteria 70.1 1.13e-13   NR MEJ2170728.1 2044940 g163379 i0 50 0.983606557377049 60 30 98.4 0 182 3 54 113 MEJ2170728.1 DUF5615 family PIN-like protein [Desulfobacterales bacterium] diamond 180 70.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales     Desulfobacterales bacterium
29195959 29195959 PRJNA605033_P_NODE_105889_length_222_cov_1.855615_g104320_i0 PRJNA605033 105889 222 1.855615 4.1194653 Desulfobacteraceae bacterium 2049433 Bacteria Bacteria 53.9 7.89e-7   NR HHO47422.1 2049433 g104320 i0 96 0.675675675675676 25 1 33.8 0 1 75 6 30 HHO47422.1 hypothetical protein [Desulfobacteraceae bacterium] diamond 150 53.9 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobacteria Desulfobacterales Desulfobacteraceae   Desulfobacteraceae bacterium
29511423 29511423 PRJNA605033_P_NODE_102690_length_222_cov_1.909091_g101121_i0 PRJNA605033 102690 222 1.909091 4.23818202 Desulfobulbus sp. 895 Bacteria Bacteria 45.8 0.00231   NR MCL2344359.1 895 g101121 i0 84 0.337837837837838 25 4 33.8 0 148 222 15 39 MCL2344359.1 Do family serine endopeptidase [Desulfobulbus sp.] diamond 75 45.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfobulbia Desulfobulbales Desulfobulbaceae Desulfobulbus Desulfobulbus sp.
30269874 30269874 PRJNA605033_P_NODE_125392_length_220_cov_4.756757_g123823_i0 PRJNA605033 125392 220 4.756757 10.4648654 Desulfovermiculus sp. 2821143 Bacteria Bacteria 50.8 3.14e-6   NR MDZ7760902.1 2821143 g123823 i0 44 1.36363636363636 50 28 68.2 0 210 61 2 51 MDZ7760902.1 hypothetical protein [Desulfovermiculus sp.] diamond 300 50.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfohalobiaceae Desulfovermiculus Desulfovermiculus sp.
30396471 30396471 PRJNA605033_P_NODE_246893_length_150_cov_3.156522_g245324_i0 PRJNA605033 246893 150 3.156522 4.734783 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 53.1 2.17e-6   NR HXG31615.1 2202153 g245324 i0 100 1.44 24 0 48 0 74 3 76 99 HXG31615.1 phosphoenolpyruvate--protein phosphotransferase [Thermodesulfobacteriota bacterium] diamond 216 53.1 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
31344100 31344100 PRJNA605033_P_NODE_83956_length_222_cov_2.363636_g82387_i0 PRJNA605033 83956 222 2.363636 5.24727192 Thermodesulfobacteriota bacterium 2202153 Bacteria Bacteria 67.8 3.92e-11   NR HZX36284.1 2202153 g82387 i0 50.7 1.95945945945946 73 23 98.6 1 2 220 188 247 HZX36284.1 Fic family protein [Thermodesulfobacteriota bacterium] diamond 435 67.8 1 Bacteria   Pseudomonadati Thermodesulfobacteriota         Thermodesulfobacteriota bacterium
32451544 32451544 PRJNA605033_P_NODE_36939_length_261_cov_1.150442_g35372_i0 PRJNA605033 36939 261 1.150442 3.00265362 Desulfovibrio sp. 885 Bacteria Bacteria 42.4 0.0473   NR WP_291439204.1 885 g35372 i0 37 0.620689655172414 54 34 62.1 0 100 261 18 71 WP_291439204.1 shikimate kinase AroL [Desulfovibrio sp.] diamond 162 42.4 1 Bacteria   Pseudomonadati Thermodesulfobacteriota Desulfovibrionia Desulfovibrionales Desulfovibrionaceae Desulfovibrio Desulfovibrio sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;