RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA605033" and tax_phylum = "Candidatus Binatota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA605033 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1857071 1857071 PRJNA605033_P_NODE_103602_length_222_cov_1.893048_g102033_i0 PRJNA605033 103602 222 1.893048 4.20256656 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 82.8 2.25e-16   NR HEX2225733.1 2838779 g102033 i0 67.6 2 74 7 100 1 222 1 566 622 HEX2225733.1 polyribonucleotide nucleotidyltransferase [Candidatus Binatia bacterium] diamond 444 82.8 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
31407426 31407426 PRJNA605033_P_NODE_72436_length_222_cov_2.919786_g70867_i0 PRJNA605033 72436 222 2.919786 6.48192492 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 86.7 1.61e-18   NR HEX5019156.1 2838779 g70867 i0 64.9 2 74 7 100 1 1 222 187 241 HEX5019156.1 enoyl-CoA hydratase family protein [Candidatus Binatia bacterium] diamond 444 86.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
32387970 32387970 PRJNA605033_P_NODE_240219_length_152_cov_1.726496_g238650_i0 PRJNA605033 240219 152 1.726496 2.62427392 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 54.7 5.89e-7   NR MET0501061.1 2838779 g238650 i0 89.3 0.552631578947368 28 3 55.3 0 152 69 133 160 MET0501061.1 tyrosine-type recombinase/integrase [Candidatus Binatia bacterium] diamond 84 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;