RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA605033", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Synergistota · 3 ✖

tax_kingdom 1

  • Thermotogati · 3 ✖

bioproject 1

  • PRJNA605033 · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
12060566 12060566 PRJNA605033_P_NODE_118670_length_222_cov_1.604278_g117101_i0 PRJNA605033 118670 222 1.604278 3.56149716 Pyramidobacter sp. YE332 3068894 Bacteria Bacteria 76.8 1.17e-9   NTclustered gi|2601021520|gb|CP133038.1| 3068894 g117101 i0 88.889 0.801801801801802 63 5 28 2 151 212 1054951 1055012 Pyramidobacter sp. YE332 chromosome, complete genome blastn 178 76.8 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Pyramidobacter Pyramidobacter sp. YE332
26840375 26840375 PRJNA605033_P_NODE_194221_length_168_cov_2.105263_g192652_i0 PRJNA605033 194221 168 2.105263 3.53684184 Bacteria 2 Bacteria Bacteria 58.2 3.83e-9   NR MBQ7217111.1 2053624 g192652 i0 50.9 6.375 53 26 94.6 0 161 3 8 60 MBQ7217111.1 hypothetical protein [Synergistaceae bacterium] diamond 1071 58.5 0.994871794871795 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32134995 32134995 PRJNA605033_P_NODE_236118_length_153_cov_2.330508_g234549_i0 PRJNA605033 236118 153 2.330508 3.56567724 Thermovirgaceae bacterium 3041276 Bacteria Bacteria 52.4 4.23e-6   NR MDT8283972.1 3041276 g234549 i0 54.3 3.33333333333333 46 19 90.2 2 140 3 29 72 MDT8283972.1 DNA polymerase III subunit gamma/tau [Thermovirgaceae bacterium] diamond 510 52.4 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Thermovirgaceae   Thermovirgaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;