contig_metadata
38 rows where bioproject = "PRJNA605033", tax_kingdom = "Pseudomonadati" and tax_phylum = "Campylobacterota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1144669 | 1144669 | PRJNA605033_P_NODE_104801_length_222_cov_1.871658_g103232_i0 | PRJNA605033 | 104801 | 222 | 1.871658 | 4.15508076 | Campylobacter | 194 | Bacteria | Bacteria | 135 | 1.9e-27 | NTclustered | gi|2093921460|gb|CP082871.1| | 76517 | g103232 | i0 | 100 | 1.4954954954955 | 73 | 0 | 67 | 0 | 148 | 220 | 1474898 | 1474826 | Campylobacter hominis strain FDAARGOS_1467 chromosome, complete genome | blastn | 332 | 135 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 1145399 | 1145399 | PRJNA605033_P_NODE_223721_length_157_cov_1.967213_g222152_i0 | PRJNA605033 | 223721 | 157 | 1.967213 | 3.08852441 | root | 1 | Root_unresolved | Root_unresolved | 274 | 2.54e-69 | NTclustered | gi|2562786027|gb|CP120256.1| | 197 | g222152 | i0 | 99.338 | 98.7006369426752 | 151 | 1 | 96 | 0 | 7 | 157 | 1302517 | 1302367 | Campylobacter jejuni strain PS_41_2021 chromosome, complete genome | blastn | 15496 | 274 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 1145724 | 1145724 | PRJNA605033_P_NODE_41201_length_253_cov_2.307339_g39633_i0 | PRJNA605033 | 41201 | 253 | 2.307339 | 5.83756767 | root | 1 | Root_unresolved | Root_unresolved | 468 | 1.92e-127 | NTclustered | gi|2523954314|dbj|AP028341.1| | 195 | g39633 | i0 | 100 | 105.154150197628 | 253 | 0 | 100 | 0 | 1 | 253 | 161928 | 161676 | Campylobacter coli BCH-10328 DNA, complete genome | blastn | 26604 | 468 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 1145980 | 1145980 | PRJNA605033_P_NODE_8261_length_482_cov_1.959732_g6776_i0 | PRJNA605033 | 8261 | 482 | 1.959732 | 9.44590824 | root | 1 | Root_unresolved | Root_unresolved | 830 | 0 | NTclustered | gi|2794627034|gb|CP126368.1| | 195 | g6776 | i0 | 97.718 | 102.96265560166 | 482 | 11 | 100 | 0 | 1 | 482 | 40079 | 39598 | Campylobacter coli strain BfR-CA-15687 plasmid pBfR-CA-15687, complete sequence | blastn | 49628 | 830 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 3696131 | 3696131 | PRJNA605033_P_NODE_104383_length_222_cov_1.882353_g102814_i0 | PRJNA605033 | 104383 | 222 | 1.882353 | 4.17882366 | Campylobacter | 194 | Bacteria | Bacteria | 58.4 | 4.23e-4 | NTclustered | gi|1540241471|emb|LR134508.1| | 201 | g102814 | i0 | 100 | 6.28378378378378 | 31 | 0 | 14 | 0 | 159 | 189 | 869518 | 869488 | Campylobacter lari strain NCTC11937 genome assembly, chromosome: 1 | blastn | 1395 | 58.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter lari | ||
| 4972733 | 4972733 | PRJNA605033_P_NODE_106844_length_222_cov_1.839572_g105275_i0 | PRJNA605033 | 106844 | 222 | 1.839572 | 4.08384984 | Bacteria | 2 | Bacteria | Bacteria | 128 | 3.18e-25 | NTclustered | gi|972488604|gb|CP010480.1| | 197 | g105275 | i0 | 97.333 | 29.036036036036 | 75 | 2 | 34 | 0 | 148 | 222 | 1650497 | 1650423 | Campylobacter jejuni strain CJ677CC524, complete genome | blastn | 6446 | 128 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter jejuni | ||
| 4974107 | 4974107 | PRJNA605033_P_NODE_98624_length_222_cov_1.983957_g97055_i0 | PRJNA605033 | 98624 | 222 | 1.983957 | 4.40438454 | Campylobacter | 194 | Bacteria | Bacteria | 132 | 2.46e-26 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g97055 | i0 | 100 | 10.4504504504505 | 71 | 0 | 66 | 0 | 1 | 71 | 1710573 | 1710503 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 2320 | 132 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 6248697 | 6248697 | PRJNA605033_P_NODE_168805_length_181_cov_1.417808_g167236_i0 | PRJNA605033 | 168805 | 181 | 1.417808 | 2.56623248 | Campylobacter | 194 | Bacteria | Bacteria | 322 | 1.06e-83 | NTclustered | gi|2093921460|gb|CP082871.1| | 76517 | g167236 | i0 | 98.889 | 1.98895027624309 | 180 | 2 | 99 | 0 | 1 | 180 | 1360958 | 1360779 | Campylobacter hominis strain FDAARGOS_1467 chromosome, complete genome | blastn | 360 | 322 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 7522456 | 7522456 | PRJNA605033_P_NODE_109786_length_222_cov_1.796791_g108217_i0 | PRJNA605033 | 109786 | 222 | 1.796791 | 3.98887602 | Campylobacter | 194 | Bacteria | Bacteria | 139 | 1.47e-28 | NTclustered | gi|2093921460|gb|CP082871.1| | 76517 | g108217 | i0 | 100 | 2.3963963963964 | 75 | 0 | 68 | 0 | 148 | 222 | 265604 | 265530 | Campylobacter hominis strain FDAARGOS_1467 chromosome, complete genome | blastn | 532 | 139 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 7523512 | 7523512 | PRJNA605033_P_NODE_46086_length_245_cov_2.671429_g44518_i0 | PRJNA605033 | 46086 | 245 | 2.671429 | 6.54500105 | root | 1 | Root_unresolved | Root_unresolved | 390 | 4.129999999999999e-104 | NTclustered | gi|1752751059|gb|CP044175.1| | 195 | g44518 | i0 | 94.902 | 21.3673469387755 | 255 | 3 | 100 | 2 | 1 | 245 | 1631493 | 1631747 | Campylobacter coli strain AR-0411 chromosome, complete genome | blastn | 5235 | 390 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 9511648 | 9511648 | PRJNA605033_P_NODE_96408_length_222_cov_2.032086_g94839_i0 | PRJNA605033 | 96408 | 222 | 2.032086 | 4.51123092 | Sulfurospirillum cavolei | 366522 | Bacteria | Bacteria | 139 | 1.47e-28 | NTclustered | gi|757804896|dbj|AP014724.1| | 366522 | g94839 | i0 | 100 | 1.33783783783784 | 75 | 0 | 68 | 0 | 148 | 222 | 2169385 | 2169311 | Sulfurospirillum cavolei DNA, complete genome | blastn | 297 | 139 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurospirillaceae | Sulfurospirillum | Sulfurospirillum cavolei | ||
| 10073634 | 10073634 | PRJNA605033_P_NODE_181368_length_174_cov_2.388489_g179799_i0 | PRJNA605033 | 181368 | 174 | 2.388489 | 4.15597086 | Bacteria | 2 | Bacteria | Bacteria | 322 | 1.01e-83 | NTclustered | gi|2323232558|gb|CP109813.1| | 195 | g179799 | i0 | 100 | 373.436781609195 | 174 | 0 | 100 | 0 | 1 | 174 | 554107 | 553934 | Campylobacter coli strain CC20JX12 chromosome, complete genome | blastn | 64978 | 322 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 12624253 | 12624253 | PRJNA605033_P_NODE_200570_length_165_cov_3.584615_g199001_i0 | PRJNA605033 | 200570 | 165 | 3.584615 | 5.91461475 | Campylobacter | 194 | Bacteria | Bacteria | 147 | 6.149999999999999e-31 | NTclustered | gi|1829985141|gb|CP050963.1| | 827 | g199001 | i0 | 93.878 | 38.0909090909091 | 98 | 5 | 59 | 1 | 2 | 99 | 7451 | 7355 | Campylobacter ureolyticus strain FDAARGOS_673 chromosome | blastn | 6285 | 147 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 13898536 | 13898536 | PRJNA605033_P_NODE_100451_length_222_cov_1.946524_g98882_i0 | PRJNA605033 | 100451 | 222 | 1.946524 | 4.32128328 | Campylobacter | 194 | Bacteria | Bacteria | 130 | 8.84e-26 | NTclustered | gi|2093921460|gb|CP082871.1| | 76517 | g98882 | i0 | 97.368 | 1.34234234234234 | 76 | 2 | 67 | 0 | 1 | 76 | 283981 | 283906 | Campylobacter hominis strain FDAARGOS_1467 chromosome, complete genome | blastn | 298 | 130 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 15172840 | 15172840 | PRJNA605033_P_NODE_101832_length_222_cov_1.925134_g100263_i0 | PRJNA605033 | 101832 | 222 | 1.925134 | 4.27379748 | Campylobacter | 194 | Bacteria | Bacteria | 139 | 1.47e-28 | NTclustered | gi|1938724023|gb|CP060707.1| | 199 | g100263 | i0 | 100 | 6.41891891891892 | 75 | 0 | 68 | 0 | 148 | 222 | 37936 | 37862 | Campylobacter concisus strain P1CDO2 chromosome, complete genome | blastn | 1425 | 139 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 18996879 | 18996879 | PRJNA605033_P_NODE_239415_length_152_cov_2.461538_g237846_i0 | PRJNA605033 | 239415 | 152 | 2.461538 | 3.74153776 | Helicobacter | 209 | Bacteria | Bacteria | 281 | 1.46e-71 | NTclustered | gi|50957150|gb|AY596235.1| | 29419 | g237846 | i0 | 100 | 123.078947368421 | 152 | 0 | 100 | 0 | 1 | 152 | 1136 | 1287 | Helicobacter canis strain ATCC 51402 23S ribosomal RNA gene, partial sequence | blastn | 18708 | 281 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter canis | ||
| 19709105 | 19709105 | PRJNA605033_P_NODE_246476_length_150_cov_3.617391_g244907_i0 | PRJNA605033 | 246476 | 150 | 3.617391 | 5.4260865 | Sulfonitrofixus jiaomeiensis | 3131938 | Bacteria | Bacteria | 52.8 | 0.012 | NTclustered | gi|2732806143|gb|CP147919.1| | 3131938 | g244907 | i0 | 96.774 | 0.206666666666667 | 31 | 1 | 21 | 0 | 45 | 75 | 1022972 | 1022942 | Sulfurimonas sp. HSL3-7 chromosome, complete genome | blastn | 31 | 52.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Sulfurimonadaceae | Sulfonitrofixus | Sulfonitrofixus jiaomeiensis | ||
| 19709763 | 19709763 | PRJNA605033_P_NODE_88396_length_222_cov_2.224599_g86827_i0 | PRJNA605033 | 88396 | 222 | 2.224599 | 4.93860978 | Campylobacter showae | 204 | Bacteria | Bacteria | 121 | 5.319999999999999e-23 | NTclustered | gi|1483583555|emb|LT631479.1| | 204 | g86827 | i0 | 95.946 | 3.98648648648649 | 74 | 3 | 33 | 0 | 148 | 221 | 1824871 | 1824798 | Campylobacter showae strain B91_TPP genome assembly, chromosome: I | blastn | 885 | 121 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter showae | ||
| 20983494 | 20983494 | PRJNA605033_P_NODE_105157_length_222_cov_1.866310_g103588_i0 | PRJNA605033 | 105157 | 222 | 1.86631 | 4.1432082 | Campylobacter concisus | 199 | Bacteria | Bacteria | 128 | 3.18e-25 | NTclustered | gi|1935895612|gb|CP049232.1| | 199 | g103588 | i0 | 97.333 | 3.64864864864865 | 75 | 2 | 34 | 0 | 1 | 75 | 1879229 | 1879303 | Campylobacter concisus strain H9O-S2 chromosome, complete genome | blastn | 810 | 128 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 20985497 | 20985497 | PRJNA605033_P_NODE_90137_length_222_cov_2.181818_g88568_i0 | PRJNA605033 | 90137 | 222 | 2.181818 | 4.84363596 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 121 | 5.319999999999999e-23 | NTclustered | gi|909715533|gb|CP012195.1| | 1032069 | g88568 | i0 | 95.946 | 4.66666666666667 | 74 | 3 | 33 | 0 | 1 | 74 | 148232 | 148159 | Campylobacter ureolyticus RIGS 9880 chromosome, complete genome | blastn | 1036 | 121 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 21547277 | 21547277 | PRJNA605033_P_NODE_228337_length_156_cov_0.991736_g226768_i0 | PRJNA605033 | 228337 | 156 | 0.991736 | 1.54710816 | Campylobacter | 194 | Bacteria | Bacteria | 261 | 1.96e-65 | NTclustered | gi|2093921460|gb|CP082871.1| | 76517 | g226768 | i0 | 96.795 | 2 | 156 | 5 | 100 | 0 | 1 | 156 | 282815 | 282970 | Campylobacter hominis strain FDAARGOS_1467 chromosome, complete genome | blastn | 312 | 261 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 23535702 | 23535702 | PRJNA605033_P_NODE_99899_length_222_cov_1.957219_g98330_i0 | PRJNA605033 | 99899 | 222 | 1.957219 | 4.34502618 | Campylobacter concisus | 199 | Bacteria | Bacteria | 137 | 5.279999999999999e-28 | NTclustered | gi|1938721720|gb|CP049266.1| | 199 | g98330 | i0 | 100 | 2.99099099099099 | 74 | 0 | 33 | 0 | 149 | 222 | 935151 | 935224 | Campylobacter concisus strain P1CDO3 chromosome, complete genome | blastn | 664 | 137 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 24096472 | 24096472 | PRJNA605033_P_NODE_100099_length_222_cov_1.957219_g98530_i0 | PRJNA605033 | 100099 | 222 | 1.957219 | 4.34502618 | Campylobacter | 194 | Bacteria | Bacteria | 139 | 1.47e-28 | NTclustered | gi|1938724023|gb|CP060707.1| | 199 | g98530 | i0 | 100 | 19.2432432432432 | 75 | 0 | 34 | 0 | 148 | 222 | 382602 | 382676 | Campylobacter concisus strain P1CDO2 chromosome, complete genome | blastn | 4272 | 139 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter concisus | ||
| 25371802 | 25371802 | PRJNA605033_P_NODE_27160_length_288_cov_1.557312_g25597_i0 | PRJNA605033 | 27160 | 288 | 1.557312 | 4.48505856 | Campylobacter | 194 | Bacteria | Bacteria | 261 | 4.07e-65 | NTclustered | gi|2093921460|gb|CP082871.1| | 76517 | g25597 | i0 | 100 | 1.5 | 141 | 0 | 75 | 0 | 1 | 141 | 176655 | 176795 | Campylobacter hominis strain FDAARGOS_1467 chromosome, complete genome | blastn | 432 | 261 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter hominis | ||
| 26966629 | 26966629 | PRJNA605033_P_NODE_149002_length_195_cov_2.031250_g147433_i0 | PRJNA605033 | 149002 | 195 | 2.03125 | 3.9609375 | Bacteria | 2 | Bacteria | Bacteria | 110 | 6.58e-29 | NR | WP_272949338.1 | 195 | g147433 | i0 | 93.8 | 15.6923076923077 | 64 | 4 | 98.5 | 0 | 3 | 194 | 79 | 142 | WP_272949338.1 carbon starvation CstA family protein, partial [Campylobacter coli] | diamond | 3060 | 110 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter coli | ||
| 26985044 | 26985044 | PRJNA605033_P_NODE_142362_length_201_cov_50.686747_g140793_i0 | PRJNA605033 | 142362 | 201 | 50.686747 | 101.88036147 | Helicobacter pylori | 210 | Bacteria | Bacteria | 73.9 | 7.77e-16 | NR | GAA8692375.1 | 210 | g140793 | i0 | 93.8 | 0.477611940298507 | 32 | 2 | 47.8 | 0 | 2 | 97 | 14 | 45 | GAA8692375.1 hypothetical protein Kyoto145A_2350 [Helicobacter pylori] | diamond | 96 | 73.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27156106 | 27156106 | PRJNA605033_P_NODE_98882_length_222_cov_1.978610_g97313_i0 | PRJNA605033 | 98882 | 222 | 1.97861 | 4.3925142 | Bacteria | 2 | Bacteria | Bacteria | 52.4 | 1.12e-5 | NR | WP_104762197.1 | 137778 | g97313 | i0 | 88 | 15.2027027027027 | 25 | 3 | 33.8 | 0 | 148 | 222 | 133 | 157 | WP_104762197.1 GDP-mannose 4,6-dehydratase [Helicobacter aurati] | diamond | 3375 | 52.8 | 0.992424242424242 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter aurati | ||
| 27743743 | 27743743 | PRJNA605033_P_NODE_45904_length_245_cov_34.371429_g44336_i0 | PRJNA605033 | 45904 | 245 | 34.371429 | 84.21000105 | Helicobacter pylori | 210 | Bacteria | Bacteria | 42 | 0.0314 | NR | GAA9213376.1 | 210 | g44336 | i0 | 94.7 | 0.23265306122449 | 19 | 1 | 23.3 | 0 | 94 | 150 | 66 | 84 | GAA9213376.1 hypothetical protein Kyoto198A_2640 [Helicobacter pylori] | diamond | 57 | 42 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 27775202 | 27775202 | PRJNA605033_P_NODE_224244_length_157_cov_1.639344_g222675_i0 | PRJNA605033 | 224244 | 157 | 1.639344 | 2.57377008 | Helicobacter pylori | 210 | Bacteria | Bacteria | 48.9 | 1.41e-5 | NR | GAA9128289.1 | 210 | g222675 | i0 | 55.8 | 0.821656050955414 | 43 | 19 | 82.2 | 0 | 1 | 129 | 60 | 102 | GAA9128289.1 hypothetical protein Kyoto190A_1620 [Helicobacter pylori] | diamond | 129 | 48.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 28374876 | 28374876 | PRJNA605033_P_NODE_27566_length_286_cov_2.450199_g26001_i0 | PRJNA605033 | 27566 | 286 | 2.450199 | 7.00756914 | Helicobacter pylori | 210 | Bacteria | Bacteria | 40.4 | 0.0378 | NR | GAA9056084.1 | 210 | g26001 | i0 | 65 | 0.20979020979021 | 20 | 7 | 21 | 0 | 12 | 71 | 1 | 20 | GAA9056084.1 hypothetical protein Kyoto184A_04520 [Helicobacter pylori] | diamond | 60 | 40.4 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29038216 | 29038216 | PRJNA605033_P_NODE_16628_length_348_cov_27.543131_g15078_i0 | PRJNA605033 | 16628 | 348 | 27.543131 | 95.85009588 | Helicobacter pylori | 210 | Bacteria | Bacteria | 55.1 | 4.43e-7 | NR | GAA9106486.1 | 210 | g15078 | i0 | 97.6 | 0.706896551724138 | 82 | 2 | 70.7 | 0 | 347 | 102 | 1 | 82 | GAA9106486.1 hypothetical protein Kyoto184A_09600 [Helicobacter pylori] | diamond | 246 | 55.1 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 29416742 | 29416742 | PRJNA605033_P_NODE_247389_length_150_cov_2.686957_g245820_i0 | PRJNA605033 | 247389 | 150 | 2.686957 | 4.0304355 | Helicobacter pylori | 210 | Bacteria | Bacteria | 66.6 | 5.01e-12 | NR | GAA9038119.1 | 210 | g245820 | i0 | 72.9 | 0.96 | 48 | 13 | 96 | 0 | 145 | 2 | 53 | 100 | GAA9038119.1 hypothetical protein Kyoto184A_01030 [Helicobacter pylori] | diamond | 144 | 66.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30206219 | 30206219 | PRJNA605033_P_NODE_98192_length_222_cov_1.994652_g96623_i0 | PRJNA605033 | 98192 | 222 | 1.994652 | 4.42812744 | Helicobacter pylori | 210 | Bacteria | Bacteria | 51.6 | 2.95e-6 | NR | GAA9128289.1 | 210 | g96623 | i0 | 43.1 | 1.75675675675676 | 65 | 18 | 87.8 | 1 | 222 | 28 | 22 | 67 | GAA9128289.1 hypothetical protein Kyoto190A_1620 [Helicobacter pylori] | diamond | 390 | 51.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30333317 | 30333317 | PRJNA605033_P_NODE_8712_length_469_cov_4.576037_g7217_i0 | PRJNA605033 | 8712 | 469 | 4.576037 | 21.46161353 | Helicobacter pylori | 210 | Bacteria | Bacteria | 46.6 | 6.45e-4 | NR | GAA8766134.1 | 210 | g7217 | i0 | 90.5 | 0.134328358208955 | 21 | 2 | 13.4 | 0 | 228 | 290 | 1 | 21 | GAA8766134.1 hypothetical protein Kyoto147A_4290 [Helicobacter pylori] | diamond | 63 | 46.6 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30377982 | 30377982 | PRJNA605033_P_NODE_195472_length_167_cov_13.356061_g193903_i0 | PRJNA605033 | 195472 | 167 | 13.356061 | 22.30462187 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 58.9 | 2.14e-9 | NR | GAA9176272.1 | 210 | g193903 | i0 | 85.2 | 1.92215568862275 | 27 | 4 | 48.5 | 0 | 158 | 78 | 1 | 27 | GAA9176272.1 hypothetical protein Kyoto193A_0470 [Helicobacter pylori] | diamond | 321 | 58.9 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30428068 | 30428068 | PRJNA605033_P_NODE_9193_length_457_cov_3.500000_g7686_i0 | PRJNA605033 | 9193 | 457 | 3.5 | 15.995 | Helicobacter pylori | 210 | Bacteria | Bacteria | 58.5 | 2.02e-8 | NR | GAA8732422.1 | 210 | g7686 | i0 | 100 | 0.183807439824945 | 28 | 0 | 18.4 | 0 | 103 | 186 | 31 | 58 | GAA8732422.1 hypothetical protein Kyoto147A_0630 [Helicobacter pylori] | diamond | 84 | 58.5 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori | ||
| 30933173 | 30933173 | PRJNA605033_P_NODE_102034_length_222_cov_1.919786_g100465_i0 | PRJNA605033 | 102034 | 222 | 1.919786 | 4.26192492 | Campylobacter ureolyticus | 827 | Bacteria | Bacteria | 54.3 | 2.29e-6 | NR | WP_016646312.1 | 827 | g100465 | i0 | 100 | 0.324324324324324 | 24 | 0 | 32.4 | 0 | 221 | 150 | 80 | 103 | WP_016646312.1 amidophosphoribosyltransferase [Campylobacter ureolyticus] | diamond | 72 | 54.3 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Campylobacteraceae | Campylobacter | Campylobacter ureolyticus | ||
| 31534016 | 31534016 | PRJNA605033_P_NODE_48276_length_242_cov_2.033816_g46708_i0 | PRJNA605033 | 48276 | 242 | 2.033816 | 4.92183472 | Helicobacter pylori | 210 | Bacteria | Bacteria | 47.8 | 5.97e-5 | NR | GAA9117791.1 | 210 | g46708 | i0 | 95.5 | 0.272727272727273 | 22 | 1 | 27.3 | 0 | 241 | 176 | 5 | 26 | GAA9117791.1 hypothetical protein Kyoto184A_10260 [Helicobacter pylori] | diamond | 66 | 47.8 | 1 | Bacteria | Pseudomonadati | Campylobacterota | Epsilonproteobacteria | Campylobacterales | Helicobacteraceae | Helicobacter | Helicobacter pylori |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;