RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA605033" and tax_kingdom = "Orthornavirae"

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analysis 2

tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA605033 · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3133269 3133269 PRJNA605033_P_NODE_229883_length_155_cov_2.033333_g228314_i0 PRJNA605033 229883 155 2.033333 3.15166615 Cucumovirus CMV 3428131 Viruses Viruses 285 1.15e-72   NTclustered gi|2593377017|gb|OR355463.1| 12305 g228314 i0 100 99.341935483871 154 0 99 0 1 154 2329 2482 Cucumber mosaic virus isolate ES223617 segment RNA1, complete sequence blastn 15398 285 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Bromoviridae Cucumovirus Cucumovirus CMV
4410177 4410177 PRJNA605033_P_NODE_247804_length_150_cov_2.217391_g246235_i0 PRJNA605033 247804 150 2.217391 3.3260865 Qianjiang marna-like virus 88 3347738 Viruses Viruses 58.4 2.63e-4   NTclustered gi|2806503524|gb|PQ055153.1| 3347738 g246235 i0 97.059 0.226666666666667 34 1 23 0 85 118 857 824 MAG: Qianjiang marna-like virus 88 isolate QJ3MS661 genomic sequence blastn 34 58.4 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Marnaviridae   Qianjiang marna-like virus 88
23534459 23534459 PRJNA605033_P_NODE_18239_length_335_cov_3.276667_g16681_i0 PRJNA605033 18239 335 3.276667 10.97683445 Chrocaturd virus 3129638 Viruses Viruses 531 3.33e-146   NTclustered gi|2717318092|gb|PP172086.1| 3129638 g16681 i0 98.99 29.0238805970149 297 2 88 1 2 297 3027 2731 MAG: Chrocaturd virus isolate CC1C_k141_57646 genomic sequence blastn 9723 531 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes       Chrocaturd virus
30111614 30111614 PRJNA605033_P_NODE_85632_length_222_cov_2.304813_g84063_i0 PRJNA605033 85632 222 2.304813 5.11668486 Dicistroviridae sp. 1955144 Viruses Viruses 60.8 1.21e-8   NR UBJ26053.1 1955144 g84063 i0 44.6 1 74 29 100 1 1 222 1115 1176 UBJ26053.1 structural polyprotein [Dicistroviridae sp.] diamond 222 60.8 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Dicistroviridae   Dicistroviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;