RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA605033", tax_kingdom = "Fungi" and tax_phylum = "Microsporidia"

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tax_superkingdom 1

tax_phylum 1

  • Microsporidia · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA605033 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
18435199 18435199 PRJNA605033_P_NODE_6355_length_554_cov_1.737958_g4938_i0 PRJNA605033 6355 554 1.737958 9.62828732 Heterosporis sp. NBDP-2013a 1289055 Fungi Fungi 75 1.16e-8   NTclustered gi|448278458|gb|KC137554.1| 1289055 g4938 i0 95.652 0.0830324909747292 46 2 8 0 241 286 2917 2962 Heterosporis sp. NBDP-2013a isolate MN/CISCO small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 46 75 1 Eukaryota Opisthokonta Fungi Microsporidia     Pleistophoridae Heterosporis Heterosporis sp. NBDP-2013a
24807944 24807944 PRJNA605033_P_NODE_157940_length_188_cov_1.562092_g156371_i0 PRJNA605033 157940 188 1.562092 2.93673296 Mitosporidium daphniae 1485682 Fungi Fungi 342 8.539999999999999e-90   NTclustered gi|914961310|ref|XM_013381898.1| 1485682 g156371 i0 99.468 3.08510638297872 188 1 100 0 1 188 359 172 Mitosporidium daphniae putative type IV secretion system protein (DI09_506p10), partial mRNA blastn 580 342 1 Eukaryota Opisthokonta Fungi Microsporidia       Mitosporidium Mitosporidium daphniae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;