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contig_metadata

27 rows where bioproject = "PRJNA605033", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 27 ✖

tax_kingdom 1

  • Bacillati · 27 ✖

bioproject 1

  • PRJNA605033 · 27 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1145470 1145470 PRJNA605033_P_NODE_23641_length_302_cov_17.812734_g22080_i0 PRJNA605033 23641 302 17.812734 53.79445668 Chthonomonas 1077265 Bacteria Bacteria 387 6.79e-103   NTclustered gi|526641997|ref|NR_103994.1| 454171 g22080 i0 89.735 459.930463576159 302 31 100 0 1 302 2208 1907 Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence blastn 138899 387 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
3697261 3697261 PRJNA605033_P_NODE_4603_length_666_cov_163.091918_g3294_i0 PRJNA605033 4603 666 163.091918 1086.19217388 Fimbriimonas 1005038 Bacteria Bacteria 904 0   NTclustered gi|663071213|gb|CP007139.1| 661478 g3294 i0 91.73 204.795795795796 653 50 98 3 11 662 28224 28873 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 136394 904 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
5685858 5685858 PRJNA605033_P_NODE_197505_length_167_cov_1.227273_g195936_i0 PRJNA605033 197505 167 1.227273 2.04954591 Capsulimonas sp. 2494211 Bacteria Bacteria 93.6 1.44e-20   NR WP_348222155.1 2494211 g195936 i0 71.7 0.952095808383233 53 15 95.2 0 159 1 442 494 WP_348222155.1 RICIN domain-containing protein [Capsulimonas sp.] diamond 159 93.6 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.
8236019 8236019 PRJNA605033_P_NODE_48707_length_241_cov_2.825243_g47139_i0 PRJNA605033 48707 241 2.825243 6.80883563 FCB group 1783270 Bacteria Bacteria 88.6 2.71e-18   NR MBC8102362.1 2033014 g47139 i0 84.6 3.23651452282158 52 8 64.7 0 2 157 392 443 MBC8102362.1 copper-translocating P-type ATPase [Armatimonadota bacterium] diamond 780 89.4 0.991051454138702 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
10786908 10786908 PRJNA605033_P_NODE_29249_length_280_cov_2.767347_g27683_i0 PRJNA605033 29249 280 2.767347 7.7485716 Armatimonadota bacterium 2033014 Bacteria Bacteria 124 5.39e-24   NTclustered gi|2314718026|dbj|AP024674.1| 2033014 g27683 i0 92.222 5.78928571428571 90 3 31 4 167 252 1760385 1760474 MAG: Armatimonadetes bacterium KatS3mg024 DNA, complete genome blastn 1621 124 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
12061924 12061924 PRJNA605033_P_NODE_249870_length_150_cov_1.034783_g248301_i0 PRJNA605033 249870 150 1.034783 1.5521745 Chthonomonadales bacterium 2282151 Bacteria Bacteria 95.1 2.67e-21   NR MCW3053422.1 2282151 g248301 i0 91.8 2.94 49 4 98 0 148 2 168 216 MCW3053422.1 ammonium transporter [Chthonomonadales bacterium] diamond 441 95.1 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
18434672 18434672 PRJNA605033_P_NODE_24475_length_298_cov_5.038023_g22914_i0 PRJNA605033 24475 298 5.038023 15.01330854 Fimbriimonas sp. 1936159 Bacteria Bacteria 399 8.589999999999998e-107   NTclustered gi|2778022393|emb|OZ123194.1| 1936159 g22914 i0 93.091 134.338926174497 275 15 92 4 2 274 1688592 1688864 MAG: Fimbriimonas sp. isolate MsE-30jul19-LR-01 genome assembly, chromosome: 1 blastn 40033 399 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas sp.
25371430 25371430 PRJNA605033_P_NODE_18740_length_331_cov_4.584459_g17181_i0 PRJNA605033 18740 331 4.584459 15.17455929 Fimbriimonas 1005038 Bacteria Bacteria 499 9.26e-137   NTclustered gi|663071213|gb|CP007139.1| 661478 g17181 i0 94.19 953.021148036254 327 19 99 0 1 327 27193 26867 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 315450 499 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26858943 26858943 PRJNA605033_P_NODE_90081_length_222_cov_2.181818_g88512_i0 PRJNA605033 90081 222 2.181818 4.84363596 Armatimonadota bacterium 2033014 Bacteria Bacteria 66.2 1.32e-10   NR MBC8103130.1 2033014 g88512 i0 59.7 1.94594594594595 72 10 97.3 1 2 217 22 74 MBC8103130.1 LptF/LptG family permease [Armatimonadota bacterium] diamond 432 66.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
26890457 26890457 PRJNA605033_P_NODE_174501_length_178_cov_1.118881_g172932_i0 PRJNA605033 174501 178 1.118881 1.99160818 Armatimonadota bacterium 2033014 Bacteria Bacteria 105 9.72e-26   NR MBC8134933.1 2033014 g172932 i0 83.1 0.99438202247191 59 10 99.4 0 177 1 1 59 MBC8134933.1 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))-dimethyltransferase RsmA [Armatimonadota bacterium] diamond 177 105 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27048522 27048522 PRJNA605033_P_NODE_61022_length_225_cov_2.863158_g59454_i0 PRJNA605033 61022 225 2.863158 6.4421055 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 55.8 5.55e-7   NR MCW3096217.1 2739509 g59454 i0 86.2 0.8 29 4 38.7 0 131 217 125 153 MCW3096217.1 methyltransferase, CheR-type [Chthonomonadaceae bacterium] diamond 180 55.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
27585581 27585581 PRJNA605033_P_NODE_177584_length_176_cov_2.070922_g176015_i0 PRJNA605033 177584 176 2.070922 3.64482272 Armatimonadota bacterium 2033014 Bacteria Bacteria 74.3 7.62e-14   NR MBC8139458.1 2033014 g176015 i0 66.7 0.920454545454545 54 18 92 0 11 172 60 113 MBC8139458.1 NAD(P)-dependent oxidoreductase [Armatimonadota bacterium] diamond 162 74.3 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
27932876 27932876 PRJNA605033_P_NODE_150485_length_194_cov_1.339623_g148916_i0 PRJNA605033 150485 194 1.339623 2.59886862 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 122 2.1999999999999994e-33   NR MCW3099609.1 2739509 g148916 i0 100 0.989690721649485 64 0 99 0 1 192 104 167 MCW3099609.1 Response regulator [Chthonomonadaceae bacterium] diamond 192 122 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
28229940 28229940 PRJNA605033_P_NODE_125266_length_221_cov_1.306452_g123697_i0 PRJNA605033 125266 221 1.306452 2.88725892 Bacillati 1783272 Bacteria Bacteria 92.8 2.81e-20   NR MCC2669118.1 2033014 g123697 i0 58.9 2.97285067873303 73 30 99.1 0 1 219 114 186 MCC2669118.1 recombination protein RecF [Armatimonadota bacterium] diamond 657 92.8 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28406586 28406586 PRJNA605033_P_NODE_242406_length_151_cov_3.353448_g240837_i0 PRJNA605033 242406 151 3.353448 5.06370648 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 49.3 4.65e-5   NR HZT41030.1 2739509 g240837 i0 48 0.993377483443709 50 25 99.3 1 2 151 3 51 HZT41030.1 HAD family hydrolase [Chthonomonadaceae bacterium] diamond 150 49.3 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
28532983 28532983 PRJNA605033_P_NODE_192727_length_169_cov_1.470149_g191158_i0 PRJNA605033 192727 169 1.470149 2.48455181 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 83.2 3.55e-17   NR MCW3097287.1 2739509 g191158 i0 97.5 0.710059171597633 40 1 71 0 50 169 4 43 MCW3097287.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 120 83.2 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
28753782 28753782 PRJNA605033_P_NODE_205167_length_164_cov_1.038760_g203598_i0 PRJNA605033 205167 164 1.03876 1.7035664 Armatimonadota bacterium 2033014 Bacteria Bacteria 52.4 4.74e-6   NR MBC8138567.1 2033014 g203598 i0 67.7 3.23780487804878 31 10 56.7 0 1 93 271 301 MBC8138567.1 SDR family oxidoreductase [Armatimonadota bacterium] diamond 531 52.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29700683 29700683 PRJNA605033_P_NODE_66770_length_222_cov_3.572193_g65201_i0 PRJNA605033 66770 222 3.572193 7.93026846 Armatimonadota bacterium 2033014 Bacteria Bacteria 78.2 8.91e-15   NR MBC8104552.1 2033014 g65201 i0 61.6 5.91891891891892 73 21 98.6 1 2 220 320 385 MBC8104552.1 DNA repair protein RadA [Armatimonadota bacterium] diamond 1314 78.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30364851 30364851 PRJNA605033_P_NODE_43852_length_249_cov_1.859813_g42284_i0 PRJNA605033 43852 249 1.859813 4.63093437 Capsulimonas sp. 2494211 Bacteria Bacteria 57.4 2.76e-7   NR WP_348219441.1 2494211 g42284 i0 78.8 0.795180722891566 33 7 39.8 0 3 101 763 795 WP_348219441.1 hypothetical protein [Capsulimonas sp.] diamond 198 57.4 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas sp.
30648527 30648527 PRJNA605033_P_NODE_230953_length_155_cov_1.333333_g229384_i0 PRJNA605033 230953 155 1.333333 2.06666615 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 49.3 5.42e-5   NR MEJ5384925.1 2682145 g229384 i0 56.8 0.851612903225806 44 19 85.2 0 2 133 13 56 MEJ5384925.1 helix-turn-helix transcriptional regulator [Fimbriimonadales bacterium] diamond 132 49.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
30838364 30838364 PRJNA605033_P_NODE_38434_length_258_cov_1.860987_g36866_i0 PRJNA605033 38434 258 1.860987 4.80134646 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 52.4 1.66e-5   NR MCW3101099.1 2739509 g36866 i0 49 0.569767441860465 49 23 57 2 110 256 33 79 MCW3101099.1 hypothetical protein [Chthonomonadaceae bacterium] diamond 147 52.4 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
31059800 31059800 PRJNA605033_P_NODE_138515_length_206_cov_1.637427_g136946_i0 PRJNA605033 138515 206 1.637427 3.37309962 Armatimonadota bacterium 2033014 Bacteria Bacteria 110 2.02e-26   NR MBC8138414.1 2033014 g136946 i0 82.1 0.975728155339806 67 12 97.6 0 4 204 380 446 MBC8138414.1 PAS domain-containing protein [Armatimonadota bacterium] diamond 201 110 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31091124 31091124 PRJNA605033_P_NODE_208415_length_162_cov_3.409449_g206846_i0 PRJNA605033 208415 162 3.409449 5.52330738 Armatimonadota bacterium 2033014 Bacteria Bacteria 65.1 1.66e-10   NR MCC6445770.1 2033014 g206846 i0 60.4 0.888888888888889 48 19 88.9 0 150 7 250 297 MCC6445770.1 beta-propeller fold lactonase family protein [Armatimonadota bacterium] diamond 144 65.1 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
31122300 31122300 PRJNA605033_P_NODE_106975_length_222_cov_1.839572_g105406_i0 PRJNA605033 106975 222 1.839572 4.08384984 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 56.2 4.54e-7   NR MBX3117924.1 2682144 g105406 i0 95.8 0.324324324324324 24 1 32.4 0 73 2 293 316 MBX3117924.1 formylglycine-generating enzyme family protein [Fimbriimonadaceae bacterium] diamond 72 56.2 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
31755148 31755148 PRJNA605033_P_NODE_219757_length_158_cov_3.487805_g218188_i0 PRJNA605033 219757 158 3.487805 5.5107319 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 46.2 6.97e-4   NR MCW3098522.1 2739509 g218188 i0 66.7 1.06329113924051 30 7 57 1 157 68 467 493 MCW3098522.1 regulatory protein [Chthonomonadaceae bacterium] diamond 168 46.2 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
32039973 32039973 PRJNA605033_P_NODE_208078_length_162_cov_5.173228_g206509_i0 PRJNA605033 208078 162 5.173228 8.38062936 Chthonomonadales bacterium 2282151 Bacteria Bacteria 76.3 1.76e-14   NR MCW3050877.1 2282151 g206509 i0 72.1 3.92592592592593 43 12 79.6 0 1 129 350 392 MCW3050877.1 amino acid/polyamine/organocation transporter,APC superfamily [Chthonomonadales bacterium] diamond 636 76.3 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales     Chthonomonadales bacterium
32797919 32797919 PRJNA605033_P_NODE_156460_length_189_cov_1.727273_g154891_i0 PRJNA605033 156460 189 1.727273 3.26454597 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 60.8 7.27e-9   NR HZT42180.1 2739509 g154891 i0 65.2 0.73015873015873 46 16 73 0 142 5 23 68 HZT42180.1 APC family permease [Chthonomonadaceae bacterium] diamond 138 60.8 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;