RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA605033", tax_clade = "Sar" and tax_phylum = "Cercozoa"

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tax_superkingdom 1

tax_phylum 1

  • Cercozoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA605033 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3132072 3132072 PRJNA605033_P_NODE_10023_length_437_cov_4.184080_g8501_i0 PRJNA605033 10023 437 4.18408 18.2844296 Cercomonas sp. HFCC53 458867 SAR_Eukaryotes SAR_Eukaryotes 797 0   NTclustered gi|161015705|gb|EF681939.1| 458867 g8501 i0 99.542 40.6201372997712 437 2 100 0 1 437 192 628 Cercomonas sp. HFCC53 28S ribosomal RNA gene, partial sequence blastn 17751 797 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Cercomonas Cercomonas sp. HFCC53
5684949 5684949 PRJNA605033_P_NODE_10185_length_434_cov_6.639098_g8663_i0 PRJNA605033 10185 434 6.639098 28.81368532 Paracercomonas marina 372086 SAR_Eukaryotes SAR_Eukaryotes 785 0   NTclustered gi|88792583|gb|DQ386164.1| 372086 g8663 i0 99.309 100.334101382488 434 3 100 0 1 434 1959 1526 Paracercomonas marina 28S ribosomal RNA gene, partial sequence blastn 43545 785 1 Eukaryota Sar   Cercozoa   Cercomonadida Cercomonadidae Paracercomonas Paracercomonas marina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;