RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA605033", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA605033 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20983504 20983504 PRJNA605033_P_NODE_106817_length_222_cov_1.844920_g105248_i0 PRJNA605033 106817 222 1.84492 4.0957224 Gamsiella multidivaricata 101098 Fungi Fungi 84.2 6.98e-12   NTclustered gi|2323770774|ref|XM_051559324.1| 101098 g105248 i0 86.842 1.53603603603604 76 9 34 1 148 222 1702 1627 Gamsiella multidivaricata glutamine synthetase type III N terminal-domain-containing protein (BC939DRAFT_486078), mRNA blastn 341 84.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Gamsiella Gamsiella multidivaricata
25371458 25371458 PRJNA605033_P_NODE_194120_length_168_cov_2.248120_g192551_i0 PRJNA605033 194120 168 2.24812 3.7768416 root 1 Root_unresolved Root_unresolved 69.4 1.4e-7   NTclustered gi|1069945162|ref|XM_018441013.1| 763407 g192551 i0 97.5 5.95833333333333 40 1 24 0 1 40 163 202 Phycomyces blakesleeanus NRRL 1555(-) hypothetical protein partial mRNA blastn 1001 69.4 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Phycomycetaceae Phycomyces Phycomyces blakesleeanus
30428033 30428033 PRJNA605033_P_NODE_189513_length_170_cov_2.518519_g187944_i0 PRJNA605033 189513 170 2.518519 4.2814823 Dissophora ornata 979620 Fungi Fungi 44.3 0.00401   NR KAF8938880.1 979620 g187944 i0 51 1.34117647058824 51 21 88.2 2 19 168 183 230 KAF8938880.1 FKBP12-associated protein [Dissophora ornata] diamond 228 44.3 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Dissophora Dissophora ornata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;