RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA605033", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA605033 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22258349 22258349 PRJNA605033_P_NODE_113398_length_222_cov_1.737968_g111829_i0 PRJNA605033 113398 222 1.737968 3.85828896 Acropora muricata 159855 Cnidaria other_Eukaryota 67.6 7.03e-7   NTclustered gi|2784693878|ref|XM_067177547.1| 159855 g111829 i0 95.349 0.387387387387387 43 0 18 2 31 71 619 661 PREDICTED: Acropora muricata melanocortin receptor 4-like (LOC136911487), transcript variant X3, mRNA blastn 86 67.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata
29290545 29290545 PRJNA605033_P_NODE_88649_length_222_cov_2.219251_g87080_i0 PRJNA605033 88649 222 2.219251 4.92673722 Desmophyllum pertusum 174260 Cnidaria other_Eukaryota 64.3 7.23e-10   NR KAJ7376946.1 174260 g87080 i0 54.3 1.89189189189189 70 13 94.6 1 210 1 634 684 KAJ7376946.1 Cilia- and flagella-associated protein 43 [Desmophyllum pertusum] diamond 420 64.3 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Caryophylliidae Desmophyllum Desmophyllum pertusum
29764001 29764001 PRJNA605033_P_NODE_85011_length_222_cov_2.326203_g83442_i0 PRJNA605033 85011 222 2.326203 5.16417066 Paramuricea clavata 317549 Cnidaria other_Eukaryota 46.6 9e-4   NR CAB3993860.1 317549 g83442 i0 91.3 0.945945945945946 23 2 31.1 0 153 221 44 66 CAB3993860.1 inhibitor of growth 5-like [Paramuricea clavata] diamond 210 46.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Malacalcyonacea Plexauridae Paramuricea Paramuricea clavata
31388997 31388997 PRJNA605033_P_NODE_76236_length_222_cov_2.679144_g74667_i0 PRJNA605033 76236 222 2.679144 5.94769968 Scleractinia 6125 Cnidaria other_Eukaryota 51.6 2.18e-5   NR XP_044175292.1 45264 g74667 i0 34.2 4.77027027027027 73 27 98.6 2 222 4 737 788 XP_044175292.1 protein jagged-1-like [Acropora millepora] diamond 1059 51.6 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora millepora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;