RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA605033", tax_clade = "Nitrospinota/Tectimicrobiota group" and tax_phylum = "Nitrospinota"

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tax_superkingdom 1

tax_phylum 1

  • Nitrospinota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 2 ✖

bioproject 1

  • PRJNA605033 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27187891 27187891 PRJNA605033_P_NODE_142662_length_201_cov_2.530120_g141093_i0 PRJNA605033 142662 201 2.53012 5.0855412 Nitrospinaceae 407032 Bacteria Bacteria 91.3 1.71e-19   NR MBT5028960.1 2024844 g141093 i0 62.5 2.86567164179104 64 24 95.5 0 3 194 475 538 MBT5028960.1 DUF927 domain-containing protein [Nitrospina sp.] diamond 576 91.3 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota Nitrospinia Nitrospinales Nitrospinaceae Nitrospina Nitrospina sp.
28753773 28753773 PRJNA605033_P_NODE_164547_length_183_cov_3.243243_g162978_i0 PRJNA605033 164547 183 3.243243 5.93513469 Nitrospinota bacterium 2026769 Bacteria Bacteria 97.8 1.52e-22   NR RMF90685.1 2026769 g162978 i0 80 0.983606557377049 60 12 98.4 0 182 3 267 326 RMF90685.1 MAG: dihydroorotate dehydrogenase-like protein [Nitrospinota bacterium] diamond 180 97.8 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;