RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA605033", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA605033 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27914352 27914352 PRJNA605033_P_NODE_205025_length_164_cov_1.224806_g203456_i0 PRJNA605033 205025 164 1.224806 2.00868184 Bacteria 2 Bacteria Bacteria 88.6 1.82e-19   NR MEE2877155.1 2026760 g203456 i0 74.1 5.92682926829268 54 14 98.8 0 163 2 98 151 MEE2877155.1 phosphoenolpyruvate hydrolase family protein [Fidelibacterota bacterium] diamond 972 88.6 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32293435 32293435 PRJNA605033_P_NODE_189999_length_170_cov_1.844444_g188430_i0 PRJNA605033 189999 170 1.844444 3.1355548 Fidelibacterota bacterium 2026760 Bacteria Bacteria 43.1 0.0103   NR MEE2858345.1 2026760 g188430 i0 51.4 0.617647058823529 35 17 61.8 0 161 57 90 124 MEE2858345.1 hypothetical protein [Fidelibacterota bacterium] diamond 105 43.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;