RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA605033", tax_clade = "Discoba" and tax_phylum = "Euglenozoa"

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tax_superkingdom 1

tax_phylum 1

  • Euglenozoa · 6 ✖

tax_clade 1

  • Discoba · 6 ✖

bioproject 1

  • PRJNA605033 · 6 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4972759 4972759 PRJNA605033_P_NODE_11284_length_414_cov_1.989446_g9754_i0 PRJNA605033 11284 414 1.989446 8.23630644 Trypanosoma 5690 Euglenozoa other_Eukaryota 464 4.31e-126   NTclustered gi|62175522|gb|AC159414.1| 5691 g9754 i0 97.091 100.111111111111 275 8 66 0 1 275 64929 65203 Trypanosoma brucei chromosome 3 clone RPCI93-25B21, complete sequence blastn 41446 464 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma brucei
13336691 13336691 PRJNA605033_P_NODE_244771_length_151_cov_1.293103_g243202_i0 PRJNA605033 244771 151 1.293103 1.95258553 Neobodo designis 312471 Euglenozoa other_Eukaryota 230 5.299999999999999e-56   NTclustered gi|62871458|gb|AY998645.1| 312471 g243202 i0 94.04 64.2516556291391 151 9 100 0 1 151 723 873 Neobodo designis strain SCCAP BD51 18S ribosomal RNA gene, partial sequence blastn 9702 230 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
14610270 14610270 PRJNA605033_P_NODE_12252_length_399_cov_2.164835_g10719_i0 PRJNA605033 12252 399 2.164835 8.63769165 Neobodo designis 312471 Euglenozoa other_Eukaryota 678 0   NTclustered gi|225216795|gb|FJ176710.1| 312471 g10719 i0 97.27 156.526315789474 403 6 99 3 1 398 1108 706 Neobodo designis HFCC95 28S ribosomal RNA gene, partial sequence blastn 62454 678 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
17160424 17160424 PRJNA605033_P_NODE_29574_length_279_cov_2.434426_g28008_i0 PRJNA605033 29574 279 2.434426 6.79204854 uncultured bodonid 212100 Euglenozoa other_Eukaryota 355 1.75e-93   NTclustered gi|527891050|gb|KF188189.1| 212100 g28008 i0 89.86 99.6810035842294 286 16 100 12 1 279 34 313 Uncultured bodonid clone S5_101 18S ribosomal RNA gene, partial sequence blastn 27811 355 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Eubodonida Bodonidae   uncultured bodonid
19709462 19709462 PRJNA605033_P_NODE_51156_length_238_cov_1.610837_g49588_i0 PRJNA605033 51156 238 1.610837 3.83379206 Neobodo designis 312471 Euglenozoa other_Eukaryota 403 5.1199999999999995e-108   NTclustered gi|59891960|gb|AY753620.1| 312471 g49588 i0 97.458 99.6596638655462 236 6 99 0 1 236 1469 1704 Neobodo designis isolate TeToto3 18S ribosomal RNA gene, partial sequence blastn 23719 403 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
24809051 24809051 PRJNA605033_P_NODE_38980_length_257_cov_1.900901_g37412_i0 PRJNA605033 38980 257 1.900901 4.88531557 Trypanosoma cruzi 5693 Euglenozoa other_Eukaryota 52.8 0.023   NTclustered gi|71402537|ref|XM_799079.1| 5693 g37412 i0 100 0.108949416342412 28 0 11 0 204 231 759 786 Trypanosoma cruzi dispersed gene family protein 1 (DGF-1), putative (Tc00.1047053450019.9), partial mRNA blastn 28 52.8 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma cruzi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;