RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA605033", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Poribacteria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Poribacteria · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA605033 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24809218 24809218 PRJNA605033_P_NODE_52560_length_236_cov_1.676617_g50992_i0 PRJNA605033 52560 236 1.676617 3.95681612 uncultured Poribacteria bacterium 265321 Bacteria Bacteria 76.8 1.26e-9   NTclustered gi|2546137836|emb|OY282383.1| 265321 g50992 i0 85.135 2 74 11 31 0 163 236 5018645 5018572 MAG: uncultured Poribacteria bacterium isolate 7c199f84-8048-4b63-b208-6e17c6421a0a genome assembly, chromosome: 1 blastn 472 76.8 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         uncultured Poribacteria bacterium
30869895 30869895 PRJNA605033_P_NODE_146594_length_197_cov_2.604938_g145025_i0 PRJNA605033 146594 197 2.604938 5.13172786 Candidatus Poribacteria bacterium 2026781 Bacteria Bacteria 57.4 1.36e-7   NR MCH8295411.1 2026781 g145025 i0 40 0.989847715736041 65 38 97.5 1 197 6 203 267 MCH8295411.1 protoporphyrinogen oxidase [Candidatus Poribacteria bacterium] diamond 195 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Poribacteria         Candidatus Poribacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;