RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA605033", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Bipolaricaulota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Bipolaricaulota · 2 ✖

tax_clade 1

  • Bacteria candidate phyla · 2 ✖

bioproject 1

  • PRJNA605033 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
24809308 24809308 PRJNA605033_P_NODE_6100_length_567_cov_5.941729_g4701_i0 PRJNA605033 6100 567 5.941729 33.68960343 Bacteria 2 Bacteria Bacteria 263 3.07e-79   NR BAL59480.1 1446466 g4701 i0 73.9 2.98412698412698 188 49 99.5 0 566 3 465 652 BAL59480.1 ATP-dependent Clp protease ATP-binding subunit ClpC [Candidatus Acetithermum autotrophicum] diamond 1692 263 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota       Candidatus Acetithermum Candidatus Acetithermum autotrophicum
29385429 29385429 PRJNA605033_P_NODE_56389_length_231_cov_1.755102_g54821_i0 PRJNA605033 56389 231 1.755102 4.05428562 Candidatus Bipolaricaulota bacterium 2306012 Bacteria Bacteria 71.2 2.91e-12   NR MFC2095208.1 2306012 g54821 i0 41.6 3.93506493506493 101 35 100 1 1 231 351 451 MFC2095208.1 hydroxylamine reductase [Candidatus Bipolaricaulota bacterium] diamond 909 71.2 1 Bacteria Bacteria candidate phyla   Candidatus Bipolaricaulota         Candidatus Bipolaricaulota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;