RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA603943" and tax_phylum = "Vulcanimicrobiota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA603943 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20979944 20979944 PRJNA603943_P_NODE_55717_length_250_cov_0.870056_g55525_i0 PRJNA603943 55717 250 0.870056 2.17514 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 52.8 0.023   NTclustered gi|2874253824|emb|OY969808.1| 3107663 g55525 i0 96.774 0.124 31 1 12 0 144 174 440245 440215 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.1 genome assembly, chromosome: 1 blastn 31 52.8 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
30396367 30396367 PRJNA603943_P_NODE_42573_length_283_cov_1.461905_g42381_i0 PRJNA603943 42573 283 1.461905 4.13719115 Candidatus Cybelea sp. 2952917 Bacteria Bacteria 50.4 1.15e-4   NR HLX25562.1 2952917 g42381 i0 47.8 0.487632508833922 46 23 47.7 1 217 83 360 405 HLX25562.1 peptide ABC transporter substrate-binding protein [Candidatus Cybelea sp.] diamond 138 50.4 1 Bacteria   Bacillati Vulcanimicrobiota Vulcanimicrobiia Vulcanimicrobiales Vulcanimicrobiaceae Candidatus Cybelea Candidatus Cybelea sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;