RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA603943", tax_phylum = "Thermoplasmatota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 2 ✖

tax_phylum 1

  • Thermoplasmatota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA603943 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26649871 26649871 PRJNA603943_P_NODE_27981_length_338_cov_1.086792_g27789_i0 PRJNA603943 27981 338 1.086792 3.67335696 root 1 Root_unresolved Root_unresolved 213 1.1699999999999999e-68   NR WP_400206037.1 1291540 g27789 i0 99 2.66272189349112 100 1 88.8 0 338 39 56 155 WP_400206037.1 group II intron maturase-specific domain-containing protein [Methanomethylophilus alvi] diamond 900 215 0.990697674418605 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae Methanomethylophilus Methanomethylophilus alvi
31691828 31691828 PRJNA603943_P_NODE_14177_length_438_cov_1.282192_g13985_i0 PRJNA603943 14177 438 1.282192 5.61600096 Thermoplasmatota archaeon 2806419 Archaea Archaea 83.6 7.28e-16   NR MEM4258088.1 2806419 g13985 i0 70 0.684931506849315 50 15 34.2 0 437 288 183 232 MEM4258088.1 hypothetical protein [Thermoplasmatota archaeon] diamond 300 83.6 1 Archaea   Methanobacteriati Thermoplasmatota         Thermoplasmatota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;